RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 CPA3P15088 417 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 CPN2P22792 545 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 ITGA3P26006 1051 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 CA8P35219 290 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 NUP62P37198 522 aaPredicted RBP3.86□□□□□ -1.79
SKP1-209ENST00000522552 OR3A1P47881 315 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 CDX1P47902 265 aaPredicted RBP3.86□□□□□ -1.79
SKP1-209ENST00000522552 MAPK12P53778 367 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 IRX4P78413 519 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 ABATP80404 500 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 TGM3Q08188 693 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 FUT7Q11130 342 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 STIM1Q13586 685 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 NR1D2Q14995 579 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 MEP1AQ16819 746 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 SPDYCQ5MJ68 293 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 C6orf10Q5SRN2 563 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 C1QL3Q5VWW1 255 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 MFSD12Q6NUT3 480 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 SIGLEC15Q6ZMC9 328 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 PAQR9Q6ZVX9 377 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 MEX3DQ86XN8 651 aaKnown RBP3.86□□□□□ -1.79
SKP1-209ENST00000522552 STHQ8IWL8 128 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 ARHGAP24Q8N264 748 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 SLC43A2Q8N370 569 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 LINC01465Q8N7H1 131 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 C17orf47Q8NEP4 570 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 OR9A1PQ8NGU1 263 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 MYCBPAPQ8TBZ2 947 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 NEU4Q8WWR8 484 aaPredicted RBP3.86□□□□□ -1.79
SKP1-209ENST00000522552 EDAQ92838 391 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 ULK4Q96C45 1275 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 RNF183Q96D59 192 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 LRRC39Q96DD0 335 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 SENP8Q96LD8 212 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 FCRL4Q96PJ5 515 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 ALG12Q9BV10 488 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 FTHL17Q9BXU8 183 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 MRPL13Q9BYD1 178 aaKnown RBP3.86□□□□□ -1.79
SKP1-209ENST00000522552 WDR76Q9H967 626 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 HHATLQ9HCP6 504 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 AGPAT3Q9NRZ7 376 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 RDH8Q9NYR8 311 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 KAT6AQ92794 2004 aa3.86□□□□□ -1.79
SKP1-209ENST00000522552 PARD3Q8TEW0 1356 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 MAST3O60307 1309 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 KIF7Q2M1P5 1343 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 SPATA31A6Q5VVP1 1343 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 RNF123Q5XPI4 1314 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 TRGV11A0A075B6L2 103 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 A0A1B0GTQ1 180 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 TMEM89A2RUT3 159 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 MEI4A8MW99 385 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 M0QZ24 198 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 CLIC1O00299 241 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 PLSCR1O15162 318 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 ZNF264O43296 627 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 ZNF208O43345 1280 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 MSI1O43347 362 aaKnown RBP3.85□□□□□ -1.79
SKP1-209ENST00000522552 LRP3O75074 770 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 YEATS4O95619 227 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 TOP3BO95985 862 aaKnown RBP3.85□□□□□ -1.79
SKP1-209ENST00000522552 OR2T7P0C7T2 308 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 PABPC4LP0CB38 370 aaKnown RBP3.85□□□□□ -1.79
SKP1-209ENST00000522552 MARCKSP29966 332 aaPredicted RBP3.85□□□□□ -1.79
SKP1-209ENST00000522552 PPP2R1AP30153 589 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 FCGR2BP31994 310 aaPredicted RBP3.85□□□□□ -1.79
SKP1-209ENST00000522552 OR1D2P34982 312 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 NSFP46459 744 aaKnown RBP3.85□□□□□ -1.79
SKP1-209ENST00000522552 CDKN1BP46527 198 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 SLC1A6P48664 564 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 NR2C2P49116 596 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 SLC11A1P49279 550 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 ENTPD1P49961 510 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 COPB1P53618 953 aaKnown RBP3.85□□□□□ -1.79
SKP1-209ENST00000522552 SNRPEP62304 92 aaKnown RBP3.85□□□□□ -1.79
SKP1-209ENST00000522552 CNTN2Q02246 1040 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 ITIH3Q06033 890 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 SLC34A1Q06495 639 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 DSC1Q08554 894 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 MESP2Q0VG99 397 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 DNAJC3Q13217 504 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 ARHGEF6Q15052 776 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 KIF19Q2TAC6 998 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 ADPRMQ3LIE5 342 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 RABGAP1LQ5R372 815 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 FAM46CQ5VWP2 391 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 SIGIRRQ6IA17 410 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 TPRG1Q6ZUI0 275 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 SERINC5Q86VE9 423 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 SFTPA1Q8IWL2 248 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 LINC00469Q8N7U9 141 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 VANGL1Q8TAA9 524 aaPredicted RBP3.85□□□□□ -1.79
SKP1-209ENST00000522552 MZB1Q8WU39 189 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 MBD6Q96DN6 1003 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 NAF1Q96HR8 494 aaKnown RBP3.85□□□□□ -1.79
SKP1-209ENST00000522552 LRR1Q96L50 414 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 TEPSINQ96N21 525 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 GFI1Q99684 422 aa3.85□□□□□ -1.79
SKP1-209ENST00000522552 C17orf62Q9BQA9 187 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms