RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ECI2O75521 394 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 RAB25P57735 213 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 BTN3A2P78410 334 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 ZNF805Q5CZA5 627 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 ATG14Q6ZNE5 492 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 GPR65Q8IYL9 337 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 SVOPLQ8N434 492 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 TLCD1Q96CP7 247 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 DGCR14Q96DF8 476 aaKnown RBP15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 UBAP1Q9NZ09 502 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 ING4Q9UNL4 249 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 CFAP20Q9Y6A4 193 aaKnown RBP15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 IFT172Q9UG01 1749 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 RGS20O76081 388 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 SHMT2P34897 504 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 BMPR1AP36894 532 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 GNALP38405 381 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 GRIA2P42262 883 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 RPS9P46781 194 aaKnown RBP15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 CCT3P49368 545 aaKnown RBP15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 LPCAT4Q643R3 524 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 SLC2A11Q9BYW1 496 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 C8orf33Q9H7E9 229 aaPredicted RBP15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 SLC22A14Q9Y267 594 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 MON2Q7Z3U7 1717 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 TSPAN6O43657 245 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 EFNA1P20827 205 aaPredicted RBP15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 SMU1Q2TAY7 513 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 SMYD5Q6GMV2 418 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 NAPRTQ6XQN6 538 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 THOC6Q86W42 341 aaKnown RBP15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 BANPQ8N9N5 519 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 C7orf43Q8WVR3 580 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 EPYCQ99645 322 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 IFT27Q9BW83 186 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 P2RX2Q9UBL9 471 aa15.87■□□□□ 0.13
PCDHA3-201ENST00000522353 C9JVG2 144 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 SEMA3AQ14563 771 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 SLC5A9Q2M3M2 681 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 BICRALQ6AI39 1079 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 CDH24Q86UP0 819 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 AMIGO3Q86WK7 504 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 SLC22A15Q8IZD6 547 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 VRTNQ9H8Y1 702 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 TESMINQ9Y4I5 508 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 SPIN1Q9Y657 262 aaPredicted RBP15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 C2orf71A6NGG8 1288 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 CAPN8A6NHC0 703 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 ACADLP28330 430 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 ENPP2Q13822 863 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 SLC9A4Q6AI14 798 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 TMIGD1Q6UXZ0 262 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 ZDHHC12Q96GR4 267 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 PCDHGB7Q9Y5F8 929 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 SHOX2O60902 331 aaPredicted RBP15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 ARHGDIBP52566 201 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 SMCO1Q147U7 214 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 C12orf40Q86WS4 652 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 Q8N9G6 341 aaPredicted RBP15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 OR2M4Q96R27 311 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 GPR62Q9BZJ7 368 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 CYP8B1Q9UNU6 501 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 TMED5Q9Y3A6 229 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 PCDHGB5Q9Y5G0 923 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 PCDHGA2Q9Y5H1 932 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 TCRBV21S2A2A0A5A6 115 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 TTC24A2A3L6 582 aaPredicted RBP15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 HEPACAM2A8MVW5 462 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 SCDO00767 359 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 SLC30A4O14863 429 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 PPP2R2BQ00005 443 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 RPL6Q02878 288 aaKnown RBP15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 ZDHHC21Q8IVQ6 265 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 TMEM209Q96SK2 561 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 C12orf65Q9H3J6 166 aaKnown RBP15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 GRHL1Q9NZI5 618 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 MAN2B2Q9Y2E5 1009 aa15.86■□□□□ 0.13
PCDHA3-201ENST00000522353 CNTN5O94779 1100 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 CYP11A1P05108 521 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 DECR1Q16698 335 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 AGTRAPQ6RW13 159 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 ADGRD2Q7Z7M1 963 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 TMEM126BQ8IUX1 230 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 OR5T3Q8NGG3 340 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 FAM110BQ8TC76 370 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 WDR92Q96MX6 357 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 PCYT2Q99447 389 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 SGIP1Q9BQI5 828 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 TMEM98Q9Y2Y6 226 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 CPSF4LA6NMK7 179 aaKnown RBP15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 WASHC1A8K0Z3 465 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 ARHGEF33A8MVX0 844 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 WASH3PC4AMC7 463 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 TPD52L2O43399 206 aaKnown RBP15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 PAPSS2O95340 614 aaPredicted RBP15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 ANGPTL1O95841 491 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 EDNRBP24530 442 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 KCTD19Q17RG1 926 aaPredicted RBP15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 TOR1AIP1Q5JTV8 583 aa15.85■□□□□ 0.13
PCDHA3-201ENST00000522353 WASH2PQ6VEQ5 465 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms