RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 TUFMP49411 452 aaKnown RBP3.21□□□□□ -1.9
VPS13B-209ENST00000521559 KLK7P49862 253 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 ZNF132P52740 706 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 ARSFP54793 590 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 POLR2FP61218 127 aaKnown RBP3.21□□□□□ -1.9
VPS13B-209ENST00000521559 RPL10AP62906 217 aaKnown RBP3.21□□□□□ -1.9
VPS13B-209ENST00000521559 ROR1Q01973 937 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 GAGE1Q13065 139 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 GAGE4Q13068 117 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 DRAP1Q14919 205 aaPredicted RBP3.21□□□□□ -1.9
VPS13B-209ENST00000521559 ZNF672Q499Z4 452 aaPredicted RBP3.21□□□□□ -1.9
VPS13B-209ENST00000521559 MDH1BQ5I0G3 518 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 LIN9Q5TKA1 542 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 GFI1BQ5VTD9 330 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 ARHGAP17Q68EM7 881 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 TMEM270Q6UE05 265 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 SCARA5Q6ZMJ2 495 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 C4orf50Q6ZRC1 276 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 PAQR9Q6ZVX9 377 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 ACOT1Q86TX2 421 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 LRRTM4Q86VH4 590 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 CPOQ8IVL8 374 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 VSTM4Q8IW00 320 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 FAM71AQ8IYT1 594 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 SLC4A11Q8NBS3 891 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 TET1Q8NFU7 2136 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 VN1R2Q8NFZ6 395 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 SPPL2BQ8TCT7 592 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 PABPC5Q96DU9 382 aaKnown RBP3.21□□□□□ -1.9
VPS13B-209ENST00000521559 RNFT2Q96EX2 444 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 PCED1BQ96HM7 432 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 LRFN5Q96NI6 719 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 PGLYRP2Q96PD5 576 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 OR1F2PQ96R84 312 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 TWNKQ96RR1 684 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 HNRNPABQ99729 332 aaKnown RBP3.21□□□□□ -1.9
VPS13B-209ENST00000521559 UBXN6Q9BZV1 441 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 XPO4Q9C0E2 1151 aaKnown RBP3.21□□□□□ -1.9
VPS13B-209ENST00000521559 DPEP3Q9H4B8 488 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 FAM207AQ9NSI2 230 aaPredicted RBP3.21□□□□□ -1.9
VPS13B-209ENST00000521559 ANKRD10Q9NXR5 420 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 HMGXB4Q9UGU5 601 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 FBXW11Q9UKB1 542 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 SLC13A4Q9UKG4 626 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 GTF3C4Q9UKN8 822 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 DNAJC16Q9Y2G8 782 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.21□□□□□ -1.9
VPS13B-209ENST00000521559 TANC1Q9C0D5 1861 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 ATP8B3O60423 1300 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 ITIH6Q6UXX5 1313 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SRRM3A6NNA2 597 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-209ENST00000521559 F8VZ95 297 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 O00370 1275 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 CLDN5O00501 218 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 LINC01565O15544 149 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 KLK10O43240 276 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 HOXC11O43248 304 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-209ENST00000521559 MED7O43513 233 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 GFPT2O94808 682 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 ADAP00813 363 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 CCDC172P0C7W6 258 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 FAM200BP0CF97 657 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 TFPIP10646 304 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 CCDC130P13994 396 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 FERP16591 822 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 ZNF8P17098 575 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-209ENST00000521559 BDNFP23560 247 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 CYP2F1P24903 491 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 ADORA2BP29275 332 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 USP8P40818 1118 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 ZNF75DP51815 510 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-209ENST00000521559 VAMP2P63027 116 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 ZBED6P86452 979 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 BNC1Q01954 994 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SLC18A2Q05940 514 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 TWF1Q12792 350 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 PLD1Q13393 1074 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SNTA1Q13424 505 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SF3B4Q15427 424 aaKnown RBP eCLIP3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SLC18A3Q16572 532 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 MEA1Q16626 185 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 ZNF718Q3SXZ3 478 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 CFAP221Q4G0U5 840 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SLC39A12Q504Y0 691 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 PPM1LQ5SGD2 360 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SH2D4BQ5SQS7 431 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 INTS11Q5TA45 600 aaKnown RBP3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SFMBT2Q5VUG0 894 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 ATG16L1Q676U5 607 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SPECC1LQ69YQ0 1117 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 ANKRD54Q6NXT1 300 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 LCLAT1Q6UWP7 414 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 GSG1LQ6UXU4 331 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 PRSS45Q7RTY3 260 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 CACNA2D4Q7Z3S7 1137 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 DNAJB7Q7Z6W7 309 aaPredicted RBP3.2□□□□□ -1.9
VPS13B-209ENST00000521559 ITIH5Q86UX2 942 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SLC47A2Q86VL8 602 aa3.2□□□□□ -1.9
VPS13B-209ENST00000521559 SFTPA2Q8IWL1 248 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms