RNA–Protein interactions for RNA: ENST00000518928.1

TSNARE1-203, Transcript of t-SNARE domain containing 1, humanhuman

TSL 3

Gene TSNARE1, Length 940 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-203ENST00000518928 ITGA1P56199 1179 aa13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 GPX6P59796 221 aa13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 SLC9A5Q14940 896 aa13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 TMED2Q15363 201 aa13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 UGT8Q16880 541 aa13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 LACTB2Q53H82 288 aaPredicted RBP13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 RBM20Q5T481 1227 aaKnown RBP13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 C1orf189Q5VU69 101 aa13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 CCDC25Q86WR0 208 aa13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 SYTL1Q8IYJ3 562 aa13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 C19orf47Q8N9M1 422 aaKnown RBP13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 OR5K2Q8NHB8 316 aa13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 CFAP61Q8NHU2 1237 aa13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 NDNQ99608 321 aa13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 AARSD1Q9BTE6 412 aaKnown RBP13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 SMYD2Q9NRG4 433 aa13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 KCND3Q9UK17 655 aa13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 PLAAQ9Y263 795 aa13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 FARSAQ9Y285 508 aaKnown RBP13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 PCDHB3Q9Y5E6 796 aa13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 PSAT1Q9Y617 370 aa13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 CCDC88CQ9P219 2028 aa13.63□□□□□ -0.23
TSNARE1-203ENST00000518928 SEC16AO15027 2179 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 E5RI56 91 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 KPNA5O15131 536 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 C1QAP02745 245 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 MT-ND3P03897 115 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 PKLRP30613 574 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 CASRP41180 1078 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 MAGEA4P43358 317 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 BDKRB1P46663 353 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 MLLT10P55197 1068 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 YBX1P67809 324 aaKnown RBP13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 SRSF1Q07955 248 aaKnown RBP eCLIP13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 MGAT5Q09328 741 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 GLE1Q53GS7 698 aaKnown RBP13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 ACSBG2Q5FVE4 666 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 TMTC4Q5T4D3 741 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 KIAA0408Q6ZU52 694 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 GALNT7Q86SF2 657 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 PALM2Q8IXS6 379 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 TBC1D21Q8IYX1 336 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 ZBTB2Q8N680 514 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 KCNJ9Q92806 393 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 CLIP3Q96DZ5 547 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 GPR21Q99679 349 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 PHACTR1Q9C0D0 580 aa13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 ACTR5Q9H9F9 607 aaPredicted RBP13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 DHCR7Q9UBM7 475 aaKnown RBP13.62□□□□□ -0.23
TSNARE1-203ENST00000518928 CXorf49A8MYA2 514 aaPredicted RBP13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 RFPL1O75677 317 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 ITGAXP20702 1163 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 CYP2A7P20853 494 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 MAGP20916 626 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 PSMB5P28074 263 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 ECHS1P30084 290 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 PGGT1BP53609 377 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 CDKN2DP55273 166 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 CUL1Q13616 776 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 C3orf62Q6ZUJ4 267 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 BPHLQ86WA6 291 aaPredicted RBP13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 CARFQ8N187 725 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 CD200R1Q8TD46 325 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 CCDC68Q9H2F9 335 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 SYNPO2LQ9H987 977 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 L2HGDHQ9H9P8 463 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 LRRC4CQ9HCJ2 640 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 FAM114A2Q9NRY5 505 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 TCFL5Q9UL49 500 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 DHRS7Q9Y394 339 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 COMMD10Q9Y6G5 202 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 PTPN13Q12923 2485 aa13.61□□□□□ -0.23
TSNARE1-203ENST00000518928 A0A0J9YY10 115 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 TCRBV9S1A1TA0A576 114 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 ISM1B1AKI9 464 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 MATN2O00339 956 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 MED26O95402 600 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 MATN4O95460 622 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 MCM3P25205 808 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 SHMT2P34897 504 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 GRIA3P42263 894 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 CCL11P51671 97 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 RPS15P62841 145 aaKnown RBP13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 FOXK1P85037 733 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 RAPSNQ13702 412 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 ATP1A4Q13733 1029 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 KYNUQ16719 465 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 KLHL38Q2WGJ6 581 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 NADK2Q4G0N4 442 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 UBAP2Q5T6F2 1119 aaKnown RBP13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 TCTN3Q6NUS6 607 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 UNC5DQ6UXZ4 953 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 ASB18Q6ZVZ8 466 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 SYVN1Q86TM6 617 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 APLFQ8IW19 511 aaPredicted RBP13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 DNAJC22Q8N4W6 341 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 ZNF655Q8N720 491 aaPredicted RBP13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 OR8K5Q8NH50 307 aa13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 GABPB2Q8TAK5 448 aaPredicted RBP13.6□□□□□ -0.23
TSNARE1-203ENST00000518928 SKA2Q8WVK7 121 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms