RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 BVESQ8NE79 360 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF555Q8NEP9 628 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 ETNPPLQ8TBG4 499 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 LPPQ93052 612 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 MUL1Q969V5 352 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 FKBP10Q96AY3 582 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 RCC1LQ96I51 464 aaKnown RBP4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 CMTM3Q96MX0 182 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 GPR137Q96N19 417 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 PWWP2AQ96N64 755 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 QRFPRQ96P65 431 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 OR5M11Q96RB7 305 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 TTYH2Q9BSA4 534 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 DHRS4Q9BTZ2 278 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 HTATIP2Q9BUP3 242 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 PAPOLGQ9BWT3 736 aaKnown RBP4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF436Q9C0F3 470 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 LHPPQ9H008 270 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 BTBD1Q9H0C5 482 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 ELOVL6Q9H5J4 265 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 ERVK-5Q9HDB9 667 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 EQTNQ9NQ60 294 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 DYRK4Q9NR20 520 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 GKN1Q9NS71 199 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 NUDT15Q9NV35 164 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 THUMPD1Q9NXG2 353 aaKnown RBP4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 SPHK1Q9NYA1 384 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 TMOD3Q9NYL9 352 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 USE1Q9NZ43 259 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 OR6C2Q9NZP2 312 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 RGS17Q9UGC6 210 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 SNX6Q9UNH7 406 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 DRG1Q9Y295 367 aaKnown RBP4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 TPRKBQ9Y3C4 175 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 MFHAS1Q9Y4C4 1052 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 LYVE1Q9Y5Y7 322 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 BACE2Q9Y5Z0 518 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 CROCCQ5TZA2 2017 aa4.7□□□□□ -1.66
HMGB1P19-201ENST00000517578 KIF13BQ9NQT8 1826 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 NUP153P49790 1475 aaKnown RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 LMTK3Q96Q04 1460 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 A0A0B4J269 797 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 TCRBV3S1A0A5B6 114 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 TRABD2BA6NFA1 517 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 MFSD2BA6NFX1 497 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 HACD1B0YJ81 288 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 ACOT8O14734 319 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 PPEF2O14830 753 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 PIAS1O75925 651 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 NOL4O94818 638 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 TMEM63AO94886 807 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 GCNT3O95395 438 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 LALBAP00709 142 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 HPRP00739 348 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 IFNA2P01563 188 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 IFNGP01579 166 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 RAF1P04049 648 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 SERPINA5P05154 406 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 GLAP06280 429 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 GPIP06744 558 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 CELA3BP08861 270 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 CD63P08962 238 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 ACSM4P0C7M7 580 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 APEHP13798 732 aaKnown RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 UCHL3P15374 230 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF8P17098 575 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 TNNI1P19237 187 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 IGFBP6P24592 240 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 TACR1P25103 407 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 PTBP1P26599 531 aaKnown RBP eCLIP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 EPHA3P29320 983 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 CASP1P29466 404 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 OXTRP30559 389 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 MAT2AP31153 395 aaKnown RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 HOXC12P31275 282 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 GNALP38405 381 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 CD86P42081 329 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 CCR10P46092 362 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 NUDT2P50583 147 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 CLCNKAP51800 687 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC7A2P52569 658 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 ATXN1P54253 815 aaKnown RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 CDH8P55286 799 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF33AQ06730 810 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 DSC1Q08554 894 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 BST1Q10588 318 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 ILF3Q12906 894 aaKnown RBP eCLIP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 GRIK2Q13002 908 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 KLF10Q13118 480 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 GRB10Q13322 594 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 DYRK1AQ13627 763 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 POLD3Q15054 466 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZMYND11Q15326 602 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 CTF1Q16619 201 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 PPP1R3AQ16821 1122 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 AAK1Q2M2I8 961 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 TMEM44Q2T9K0 475 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 SMTNL2Q2TAL5 461 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 RFX4Q33E94 735 aa4.69□□□□□ -1.66
HMGB1P19-201ENST00000517578 TIMM50Q3ZCQ8 353 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms