RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 ERICH5Q6P6B1 374 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 Q6ZNB5 142 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 PIWIL3Q7Z3Z3 882 aaKnown RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 RNF180Q86T96 592 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 MFSD4AQ8N468 514 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 CLDN19Q8N6F1 224 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 OR2T29Q8NH02 315 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 CNIH3Q8TBE1 160 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 MCOLN3Q8TDD5 553 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 PHF10Q8WUB8 498 aaKnown RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 UPF1Q92900 1129 aaKnown RBP eCLIP6.49□□□□□ -1.37
CDH12-203ENST00000517378 VOPP1Q96AW1 172 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 PSD2Q9BQI7 771 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 ANKHQ9HCJ1 492 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 HCSTQ9UBK5 93 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 AFF4Q9UHB7 1163 aaKnown RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 TSR3Q9UJK0 312 aaKnown RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 ABCG2Q9UNQ0 655 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 TPRKBQ9Y3C4 175 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 PCDHB7Q9Y5E2 793 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 LAMA2P24043 3122 aaKnown RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 TMEM88BA6NKF7 163 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 ARVCFO00192 962 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 HOXA2O43364 376 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 CA12O43570 354 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 C8GP07360 202 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 GPX2P18283 190 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 ITGB6P18564 788 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 DNAJA1P31689 397 aaKnown RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 HNF1BP35680 557 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 CSKP41240 450 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 NSG1P42857 185 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 HNMTP50135 292 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 GATMP50440 423 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 DAPP51397 102 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 FADDQ13158 208 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 SLC14A1Q13336 389 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 SP140Q13342 867 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 GPNMBQ14956 572 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 CHRNA6Q15825 494 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 ZXDCQ2QGD7 858 aaPredicted RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 ADPRMQ3LIE5 342 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 LAIR1Q6GTX8 287 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 FAHD1Q6P587 224 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 MBOAT1Q6ZNC8 495 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 CEP68Q76N32 757 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 METTL3Q86U44 580 aaKnown RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 NPAS4Q8IUM7 802 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 RASGRP3Q8IV61 690 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 ZZZ3Q8IYH5 903 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 OR7A2PQ8NGA2 310 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 DYNC2LI1Q8TCX1 351 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 CSGALNACT1Q8TDX6 532 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 ADAMTS19Q8TE59 1207 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 NELL1Q92832 810 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 SPATA9Q9BWV2 254 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 SLC12A9Q9BXP2 914 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 THG1LQ9NWX6 298 aaKnown RBP6.49□□□□□ -1.37
CDH12-203ENST00000517378 SELENONQ9NZV5 590 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 CRLS1Q9UJA2 301 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 PPIL1Q9Y3C6 166 aa6.49□□□□□ -1.37
CDH12-203ENST00000517378 C2orf78A6NCI8 922 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 XPNPEP2O43895 674 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 NUAK1O60285 661 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 ATP6V1G1O75348 118 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 ABLIM3O94929 683 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 FKBP9O95302 570 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 CLDN7O95471 211 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 SEC24AO95486 1093 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 OLFM2O95897 454 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 NTRK1P04629 796 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 ALOX5P09917 674 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 AMD1P17707 334 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 EFNA1P20827 205 aaPredicted RBP6.48□□□□□ -1.37
CDH12-203ENST00000517378 HOXA9P31269 272 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 HPCAL1P37235 193 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 MASP1P48740 699 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 PXNP49023 591 aaPredicted RBP6.48□□□□□ -1.37
CDH12-203ENST00000517378 ITGA1P56199 1179 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 IL5RAQ01344 420 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 BCL2L1Q07817 233 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 SREBF2Q12772 1141 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 ITGADQ13349 1161 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 DUOXA1Q1HG43 343 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 VMACQ2NL98 169 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 PROX2Q3B8N5 592 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 IQCCQ4KMZ1 466 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 EGFLAMQ63HQ2 1017 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 BTLAQ7Z6A9 289 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 TSPYL5Q86VY4 417 aaPredicted RBP6.48□□□□□ -1.37
CDH12-203ENST00000517378 P2RY8Q86VZ1 359 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 SVOPQ8N4V2 548 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 TMCO5AQ8N6Q1 288 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 CLHC1Q8NHS4 586 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 WFDC5Q8TCV5 224 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 RORBQ92753 470 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 DACH2Q96NX9 599 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 BARD1Q99728 777 aaKnown RBP6.48□□□□□ -1.37
CDH12-203ENST00000517378 APOL4Q9BPW4 351 aa6.48□□□□□ -1.37
CDH12-203ENST00000517378 TSEN34Q9BSV6 310 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms