RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 HOPXQ9BPY8 73 aaPredicted RBP5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 TIMM29Q9BSF4 260 aa5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 MENTQ9BUN1 341 aa5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 C1orf50Q9BV19 199 aa5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 EHD1Q9H4M9 534 aa5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 BRF2Q9HAW0 419 aa5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 LRTM1Q9HBL6 345 aa5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 TM7SF3Q9NS93 570 aa5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 SPATA6Q9NWH7 488 aaPredicted RBP5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 USP36Q9P275 1121 aaKnown RBP5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 TMEM181Q9P2C4 612 aa5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 STX18Q9P2W9 335 aaKnown RBP5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 ABCD2Q9UBJ2 740 aa5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 EBF1Q9UH73 591 aa5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 CROTQ9UKG9 612 aa5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 TMED5Q9Y3A6 229 aa5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 TSC22D4Q9Y3Q8 395 aa5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 L3MBTL1Q9Y468 752 aa5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 HS3ST3A1Q9Y663 406 aa5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 KCNE2Q9Y6J6 123 aa5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 PI4KAP42356 2102 aa5.26□□□□□ -1.57
SCARNA20.4-201ENST00000516969 NCOR1O75376 2440 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 CCDC88CQ9P219 2028 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 TCRBV21S2A2A0A5A6 115 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 PRR23AA6NEV1 266 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 PRORSD1PA6NEY8 169 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 POM121BA6NF01 834 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 CHURC1-FNTBB4DL54 471 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 E7EQ34 232 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 FXYD1O00168 92 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 FOXE1O00358 373 aaPredicted RBP5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 NR5A2O00482 541 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 TNFRSF10CO14798 259 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 SLC31A1O15431 190 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 PI15O43692 258 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 FKBP6O75344 327 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 BCAS2O75934 225 aaPredicted RBP5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 KRT36O76013 467 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 APBB3O95704 486 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 RPN2P04844 631 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 ACADMP11310 421 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 PRPS2P11908 318 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 BCKDHAP12694 445 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 AMD1P17707 334 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 XRCC1P18887 633 aaPredicted RBP5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 CD72P21854 359 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 KELP23276 732 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 ME2P23368 584 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 MAT2AP31153 395 aaKnown RBP5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 HSD17B2P37059 387 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 HALP42357 657 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 CCR5P51681 352 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 CLCNKAP51800 687 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 CLDN8P56748 225 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 KCNK10P57789 538 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 C21orf58P58505 322 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 TBPL1P62380 186 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 CTBSQ01459 385 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 IRF8Q02556 426 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 FOXM1Q08050 763 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 TRAP1Q12931 704 aaKnown RBP5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 CSTF3Q12996 717 aaKnown RBP5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 FZD5Q13467 585 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 TRIM25Q14258 630 aaKnown RBP5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 CLCA4Q14CN2 919 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 MLF2Q15773 248 aaPredicted RBP5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 CCDC85BQ15834 202 aaPredicted RBP5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 USP39Q53GS9 565 aaKnown RBP5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 XKR6Q5GH73 641 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 PAGE3Q5JUK9 113 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 C10orf62Q5T681 223 aaPredicted RBP5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 ATG9BQ674R7 924 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 NXPE4Q6UWF7 544 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 SUSD1Q6UWL2 747 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 LCTLQ6UWM7 567 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 DLEU7Q6UYE1 221 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 PRR23BQ6ZRT6 265 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 SYT13Q7L8C5 426 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 FAM124AQ86V42 546 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 FAM129CQ86XR2 697 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 DCUN1D3Q8IWE4 304 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 SLC15A3Q8IY34 581 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 LAS2Q8IYD9 372 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 SYTL1Q8IYJ3 562 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 SYNPOQ8N3V7 929 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 LIX1Q8N485 282 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 TMEM145Q8NBT3 493 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 GLB1L3Q8NCI6 653 aaPredicted RBP5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 PPFIBP2Q8ND30 876 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 OR7G3Q8NG95 312 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 OR5AR1Q8NGP9 310 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 JADE3Q92613 823 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 HLA-CQ95604 372 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 NEIL2Q969S2 332 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 LRRC58Q96CX6 371 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 MED8Q96G25 268 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 LRCH3Q96II8 777 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 SLC45A3Q96JT2 553 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 TMEM74Q96NL1 305 aa5.25□□□□□ -1.57
SCARNA20.4-201ENST00000516969 INSM2Q96T92 566 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms