RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 MTPAPQ9NVV4 582 aaKnown RBP eCLIP-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MAP3K20Q9NYL2 800 aaKnown RBP-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PTTG3PQ9NZH4 202 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 THYN1Q9P016 225 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 NDUFA13Q9P0J0 144 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MYEF2Q9P2K5 600 aaKnown RBP-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ABCD2Q9UBJ2 740 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SPASTQ9UBP0 616 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ZNF69Q9UC07 566 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CD300AQ9UGN4 299 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ITGA11Q9UKX5 1188 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 RAB26Q9ULW5 256 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SUFUQ9UMX1 484 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ZNF835Q9Y2P0 537 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 RCL1Q9Y2P8 373 aaKnown RBP-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ATP6V0A2Q9Y487 856 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 NEUROG3Q9Y4Z2 214 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PCDHGB2Q9Y5G2 931 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PCDHGA5Q9Y5G8 931 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PCDHGA1Q9Y5H4 931 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 IGSF1Q8N6C5 1336 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 INSRP06213 1382 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 RALGAPA1Q6GYQ0 2036 aa-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 EIF4G3O43432 1585 aaKnown RBP-0.74□□□□□ -2.53
SCARNA21.1-201ENST00000515996 RAPGEF6Q8TEU7 1601 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 THSD7AQ9UPZ6 1657 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TUBGCP6Q96RT7 1819 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TANC1Q9C0D5 1861 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CHD4Q14839 1912 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PCM1Q15154 2024 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 NUP214P35658 2090 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ANKRD12Q6UB98 2062 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 DSCAML1Q8TD84 2053 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 IGKV2D-24A0A075B6R9 120 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 A0A087WW49 117 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 FAM234BA2RU67 622 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ODF3BA8MYP8 253 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SLCO1B7G3V0H7 640 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 M0QZ24 198 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 NME4O00746 187 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ISLRO14498 428 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 WDR46O15213 610 aaKnown RBP-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MSH4O15457 936 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 RRP8O43159 456 aaKnown RBP-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 CACNG3O60359 315 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ACSL4O60488 711 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 KPNA6O60684 536 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TBX19O60806 448 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 FKBP6O75344 327 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TNFSF13O75888 250 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 NDUFB2O95178 105 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 OLFM2O95897 454 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 GBAP04062 536 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 THY1P04216 161 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PRM1P04553 51 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MMP2P08253 660 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 HMBSP08397 361 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 VIMP08670 466 aaKnown RBP-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SNRPCP09234 159 aaKnown RBP-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ZSCAN5DPP0CG00 497 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PGA4P0DJD7 388 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PGA3P0DJD8 388 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PGA5P0DJD9 388 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 C8orf88P0DMB2 117 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PNMTP11086 282 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 B4GALT1P15291 398 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 FOSL2P15408 326 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PDE6GP18545 87 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MMP11P24347 488 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 IGFBP5P24593 272 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PRKAR2BP31323 418 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 FCGR2CP31995 323 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 IGHMBP2P38935 993 aaKnown RBP-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 UQCRFS1P47985 274 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 LSSP48449 732 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 GATMP50440 423 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 METAP2P50579 478 aaKnown RBP eCLIP-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MFAP4P55083 255 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 WNT3P56703 355 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ELF3P78545 371 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 IGLV3-21P80748 117 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ZBED6P86452 979 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 EXOSC9Q06265 439 aaKnown RBP-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TBL3Q12788 808 aaKnown RBP-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TDGQ13569 410 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 IL10RAQ13651 578 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 RUNX2Q13950 521 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 SPARCL1Q14515 664 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 KIR2DS5Q14953 304 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 ME3Q16798 604 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 MTHFSDQ2M296 383 aaKnown RBP-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 TYSND1Q2T9J0 566 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PGGHGQ32M88 737 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 KIAA1644Q3SXP7 199 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 EPC2Q52LR7 807 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 PLA1AQ53H76 456 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 DEFB121Q5J5C9 76 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 KLF17Q5JT82 389 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 AGBL2Q5U5Z8 902 aa-0.75□□□□□ -2.53
SCARNA21.1-201ENST00000515996 FAM122CQ6P4D5 195 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms