RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 NKAIN2Q5VXU1 208 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 LCTLQ6UWM7 567 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 DHRS13Q6UX07 377 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 RAB44Q7Z6P3 723 aaPredicted RBP9.9□□□□□ -0.82
HTT-204ENST00000508321 SLCO6A1Q86UG4 719 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 SLC22A9Q8IVM8 553 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 LRRC56Q8IYG6 542 aaPredicted RBP9.9□□□□□ -0.82
HTT-204ENST00000508321 C4orf33Q8N1A6 199 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 FBXO39Q8N4B4 442 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 SPATA6LQ8N4H0 392 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 BANPQ8N9N5 519 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 LMNTD1Q8N9Z9 388 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 EXT2Q93063 718 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 MED8Q96G25 268 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 IL17FQ96PD4 163 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 TGM7Q96PF1 710 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 SH3GL2Q99962 352 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 CAPS2Q9BXY5 557 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 UNKQ9C0B0 810 aaKnown RBP9.9□□□□□ -0.82
HTT-204ENST00000508321 CENPHQ9H3R5 247 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 TMBIM4Q9HC24 238 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 GPRC5BQ9NZH0 403 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 BTRCQ9Y297 605 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 STK38LQ9Y2H1 464 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 HEATR5BQ9P2D3 2071 aa9.9□□□□□ -0.82
HTT-204ENST00000508321 IGHV5-10-1A0A0J9YXX1 117 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 A0A1W2PPV9 198 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 DCDC2BA2VCK2 349 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 HMGB1P1B2RPK0 211 aaPredicted RBP9.89□□□□□ -0.83
HTT-204ENST00000508321 TARM1B6A8C7 271 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 UBXN8O00124 270 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 DYNC1I1O14576 645 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 GIPC1O14908 333 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 PRPF4O43172 522 aaKnown RBP eCLIP9.89□□□□□ -0.83
HTT-204ENST00000508321 PRICKLE3O43900 615 aaPredicted RBP9.89□□□□□ -0.83
HTT-204ENST00000508321 CSO75390 466 aaKnown RBP9.89□□□□□ -0.83
HTT-204ENST00000508321 STK16O75716 305 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 RASSF9O75901 435 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 ZWINTO95229 277 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 MSL3P1P0C860 447 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 MTHFD2P13995 350 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 CDH3P22223 829 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 ATP5F1P24539 256 aaPredicted RBP9.89□□□□□ -0.83
HTT-204ENST00000508321 PRDX3P30048 256 aaKnown RBP9.89□□□□□ -0.83
HTT-204ENST00000508321 PEBP1P30086 187 aaKnown RBP9.89□□□□□ -0.83
HTT-204ENST00000508321 MLLT3P42568 568 aaPredicted RBP9.89□□□□□ -0.83
HTT-204ENST00000508321 SLC18A1P54219 525 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 GFERP55789 205 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 RELAQ04206 551 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 ASPHQ12797 758 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 PCBP2Q15366 365 aaKnown RBP eCLIP9.89□□□□□ -0.83
HTT-204ENST00000508321 ISXQ2M1V0 245 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 PTCHD3Q3KNS1 767 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 CCDC157Q569K6 752 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 THEMIS2Q5TEJ8 643 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 ICE2Q659A1 982 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 MBOAT1Q6ZNC8 495 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 TMPRSS7Q7RTY8 843 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 ARHGAP22Q7Z5H3 698 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 C19orf47Q8N9M1 422 aaKnown RBP9.89□□□□□ -0.83
HTT-204ENST00000508321 OR2L3Q8NG85 312 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 OR2A1Q8NGT9 310 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 FLVCR1-AS1Q8TAF5 88 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 SREK1Q8WXA9 508 aaKnown RBP9.89□□□□□ -0.83
HTT-204ENST00000508321 JPH3Q8WXH2 748 aaPredicted RBP9.89□□□□□ -0.83
HTT-204ENST00000508321 TLCD1Q96CP7 247 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 CCDC74BQ96LY2 380 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 OR2A14Q96R47 310 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 TMEM79Q9BSE2 394 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 C1QTNF3Q9BXJ4 246 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 SEMA6CQ9H3T2 930 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 MRPS30Q9NP92 439 aaKnown RBP9.89□□□□□ -0.83
HTT-204ENST00000508321 SPHK1Q9NYA1 384 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 CPSF2Q9P2I0 782 aaKnown RBP9.89□□□□□ -0.83
HTT-204ENST00000508321 TAC3Q9UHF0 121 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 PTBP2Q9UKA9 531 aaKnown RBP9.89□□□□□ -0.83
HTT-204ENST00000508321 ATXN7L1Q9ULK2 861 aaPredicted RBP9.89□□□□□ -0.83
HTT-204ENST00000508321 PLLPQ9Y342 182 aa9.89□□□□□ -0.83
HTT-204ENST00000508321 CCDC187A0A096LP49 1063 aa9.88□□□□□ -0.83
HTT-204ENST00000508321 KRT87PA6NCN2 255 aa9.88□□□□□ -0.83
HTT-204ENST00000508321 NCF1BA6NI72 391 aaPredicted RBP9.88□□□□□ -0.83
HTT-204ENST00000508321 NCF1CA8MVU1 366 aaPredicted RBP9.88□□□□□ -0.83
HTT-204ENST00000508321 AGPSO00116 658 aa9.88□□□□□ -0.83
HTT-204ENST00000508321 TYROBPO43914 113 aa9.88□□□□□ -0.83
HTT-204ENST00000508321 PLIN3O60664 434 aa9.88□□□□□ -0.83
HTT-204ENST00000508321 KATNA1O75449 491 aa9.88□□□□□ -0.83
HTT-204ENST00000508321 WDR47O94967 919 aa9.88□□□□□ -0.83
HTT-204ENST00000508321 TOP3BO95985 862 aaKnown RBP9.88□□□□□ -0.83
HTT-204ENST00000508321 PROCP04070 461 aa9.88□□□□□ -0.83
HTT-204ENST00000508321 MYL2P10916 166 aa9.88□□□□□ -0.83
HTT-204ENST00000508321 NCF1P14598 390 aaPredicted RBP9.88□□□□□ -0.83
HTT-204ENST00000508321 EZRP15311 586 aaKnown RBP9.88□□□□□ -0.83
HTT-204ENST00000508321 GMPRP36959 345 aa9.88□□□□□ -0.83
HTT-204ENST00000508321 PRKAA2P54646 552 aa9.88□□□□□ -0.83
HTT-204ENST00000508321 HSD11B2P80365 405 aa9.88□□□□□ -0.83
HTT-204ENST00000508321 CFHR1Q03591 330 aa9.88□□□□□ -0.83
HTT-204ENST00000508321 PRDX1Q06830 199 aaKnown RBP9.88□□□□□ -0.83
HTT-204ENST00000508321 CDC16Q13042 620 aa9.88□□□□□ -0.83
HTT-204ENST00000508321 GPS2Q13227 327 aa9.88□□□□□ -0.83
HTT-204ENST00000508321 NAE1Q13564 534 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms