RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 CAVIN2O95810 425 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 PAK4O96013 591 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 INHBAP08476 426 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 HSPA8P11142 646 aaKnown RBP2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 FGF5P12034 268 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 HLA-DPA1P20036 260 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 AZU1P20160 251 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 CD22P20273 847 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 HPDP32754 393 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 DCTP40126 519 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 GP5P40197 560 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 MNDAP41218 407 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 LHX1P48742 406 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 MAT1AQ00266 395 aaKnown RBP2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 PRKCZQ05513 592 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 LGALS3BPQ08380 585 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZNF415Q09FC8 603 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 AP1B1Q10567 949 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 VEZF1Q14119 521 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 SLMAPQ14BN4 828 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 MORF4L2Q15014 288 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 E2F5Q15329 346 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 CA9Q16790 459 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 C2orf76Q3KRA6 126 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 PARP10Q53GL7 1025 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 WDR38Q5JTN6 314 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 ELFN2Q5R3F8 820 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 CCNYL2Q5T2Q4 361 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 STPG1Q5TH74 334 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 CAVIN1Q6NZI2 390 aaKnown RBP2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 SLC27A1Q6PCB7 646 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 TRAT1Q6PIZ9 186 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 C19orf48Q6RUI8 117 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 BTN2A1Q7KYR7 527 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 SMIM29Q86T20 159 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 MYPOPQ86VE0 399 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 CDK20Q8IZL9 346 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 ANKRD13CQ8N6S4 541 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 C10orf53Q8N6V4 93 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZNF611Q8N823 705 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 LMNTD1Q8N9Z9 388 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 THAP8Q8NA92 274 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 OLIG1Q8TAK6 271 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 SETD6Q8TBK2 473 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 GRHL3Q8TE85 626 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 GRK7Q8WTQ7 553 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 HSD17B8Q92506 261 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 EXT2Q93063 718 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 SLC47A1Q96FL8 570 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 THOC1Q96FV9 657 aaKnown RBP2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 NSL1Q96IY1 281 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 LRRC3BQ96PB8 259 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 EGFL8Q99944 293 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 FERMT1Q9BQL6 677 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 MGME1Q9BQP7 344 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 KATNB1Q9BVA0 655 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 ABCG4Q9H172 646 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 FZD8Q9H461 694 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 COPS7BQ9H9Q2 264 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 GKN1Q9NS71 199 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 ECHDC1Q9NTX5 307 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZNF701Q9NV72 531 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 HPF1Q9NWY4 346 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 COQ3Q9NZJ6 369 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 CACNG4Q9UBN1 327 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 DAPK2Q9UIK4 370 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 MOSPD1Q9UJG1 213 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 TMED3Q9Y3Q3 217 aa2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 MTF2Q9Y483 593 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P35-201ENST00000503360 GREB1LQ9C091 1923 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 A0A0U1RQK1 487 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZNF320A2RRD8 509 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 FAM172BPA6NC97 362 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 ANKRD61A6NGH8 418 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 ANXA2P2A6NMY6 339 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 DNM1LO00429 736 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 CIDEAO60543 219 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 FMO6PO60774 539 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 PRKRAO75569 313 aaKnown RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 SLC22A3O75751 556 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 PIGNO95427 931 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 TSHBP01222 138 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 PRSS1P07477 247 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 CSN3P07498 182 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 IGHV4-38-2P0DP08 117 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 SAGP10523 405 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 HAPLN1P10915 354 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 LIFP15018 202 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 PAX1P15863 534 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 PDGFRAP16234 1089 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 PTGER4P35408 488 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 CRKLP46109 303 aaKnown RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 CAPZA1P52907 286 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 CRIP2P52943 208 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 UBASH3AP57075 661 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 EVCP57679 992 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 PHEXP78562 749 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 YWHAHQ04917 246 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 SCN1BQ07699 218 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 CUL3Q13618 768 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms