RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 TAP2Q03519 686 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 RSPO4Q2I0M5 234 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-227ENST00000498056 CDKL4Q5MAI5 379 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 SNAP47Q5SQN1 464 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 FAM92BQ6ZTR7 304 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 LRRC70Q7Z2Q7 622 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 SLC22A9Q8IVM8 553 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 TMEM151AQ8N4L1 468 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 OR56A3Q8NH54 315 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 HMGCLL1Q8TB92 370 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 NUDT22Q9BRQ3 303 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 LRRN3Q9H3W5 708 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 TMEM9Q9P0T7 183 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 PTBP2Q9UKA9 531 aaKnown RBP13.11□□□□□ -0.31
CPNE1-227ENST00000498056 POMT2Q9UKY4 750 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 DYRK1BQ9Y463 629 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 ANGPTL3Q9Y5C1 460 aa13.11□□□□□ -0.31
CPNE1-227ENST00000498056 MN1Q10571 1320 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-227ENST00000498056 A0A1W2PPV9 198 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 A0A1W2PQM1 296 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 WDR91A4D1P6 747 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 D6RAR5 112 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 STX16-NPEPL1H3BU86 382 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 MATN2O00339 956 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 STX16O14662 325 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 TAPBPO15533 448 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 KLK8O60259 260 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 STK16O75716 305 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 RASSF9O75901 435 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 CCNDBP1O95273 360 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 CPNE6O95741 557 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 CSRP1P21291 193 aaKnown RBP13.1□□□□□ -0.31
CPNE1-227ENST00000498056 CDH3P22223 829 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 CD1CP29017 333 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 ARL1P40616 181 aaPredicted RBP13.1□□□□□ -0.31
CPNE1-227ENST00000498056 ETV4P43268 484 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 SERPINB4P48594 390 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 KIR2DS3Q14952 304 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 SF1Q15637 639 aaKnown RBP13.1□□□□□ -0.31
CPNE1-227ENST00000498056 PDK4Q16654 411 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 LIPMQ5VYY2 423 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 SPESP1Q6UW49 350 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 USP53Q70EK8 1073 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 ADCK2Q7Z695 626 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 TMPRSS11BQ86T26 416 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 ALYREFQ86V81 257 aaKnown RBP13.1□□□□□ -0.31
CPNE1-227ENST00000498056 THOC6Q86W42 341 aaKnown RBP13.1□□□□□ -0.31
CPNE1-227ENST00000498056 C10orf107Q8IVU9 208 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 FAM20CQ8IXL6 584 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 SREK1Q8WXA9 508 aaKnown RBP13.1□□□□□ -0.31
CPNE1-227ENST00000498056 SLC22A18Q96BI1 424 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 CCDC126Q96EE4 140 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 SGPP1Q9BX95 441 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 KLHL25Q9H0H3 589 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 ACSS2Q9NR19 701 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 DNAJC11Q9NVH1 559 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 SH2B3Q9UQQ2 575 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 SLC22A14Q9Y267 594 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 PCDHB11Q9Y5F2 797 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 ENTPD2Q9Y5L3 495 aa13.1□□□□□ -0.31
CPNE1-227ENST00000498056 CNOT1A5YKK6 2376 aaKnown RBP13.1□□□□□ -0.31
CPNE1-227ENST00000498056 A0A0J9YY10 115 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 TLCD2A6NGC4 264 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 K7EPI3 171 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 GIPC1O14908 333 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 FTH1P19P0C7X4 201 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 NEFHP12036 1026 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 MPSTP25325 297 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 CMPK1P30085 196 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 ALDH3A1P30838 453 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 HERVK_113P63132 956 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 SIM1P81133 766 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-227ENST00000498056 CDC16Q13042 620 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 MPP2Q14168 576 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 RBBP7Q16576 425 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 ZXDCQ2QGD7 858 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-227ENST00000498056 ICE2Q659A1 982 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 LCTLQ6UWM7 567 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 RPS27LQ71UM5 84 aaKnown RBP13.09□□□□□ -0.31
CPNE1-227ENST00000498056 GOLGA7Q7Z5G4 137 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 GLRX5Q86SX6 157 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 PLXDC1Q8IUK5 500 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 LRRC56Q8IYG6 542 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-227ENST00000498056 TEX9Q8N6V9 391 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 CCNYL1Q8N7R7 359 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 PPP1R14CQ8TAE6 165 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 PPP4R1Q8TF05 950 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 ZDHHC12Q96GR4 267 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 PPM1MQ96MI6 270 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 OR2A14Q96R47 310 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 OR4K3Q96R72 315 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 ERVK-6Q9BXR3 956 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 CD244Q9BZW8 370 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 TOR4AQ9NXH8 423 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 PCTPQ9UKL6 214 aa13.09□□□□□ -0.31
CPNE1-227ENST00000498056 TNPO3Q9Y5L0 923 aaKnown RBP13.09□□□□□ -0.31
CPNE1-227ENST00000498056 A8MU76 341 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 E7EQ34 232 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 AGRPO00253 132 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 E2F3O00716 465 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms