RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 PSMB5P28074 263 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 CBSP35520 551 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 PGDP52209 483 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 RRADP55042 308 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 CTBP1Q13363 440 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 GRM7Q14831 915 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 KLHL38Q2WGJ6 581 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 NKAIN1Q4KMZ8 207 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 PAPD7Q5XG87 772 aaKnown RBP15.09■□□□□ 0.01
HDAC4-213ENST00000496347 FCRL6Q6DN72 434 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 LRRC8EQ6NSJ5 796 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 FIGLAQ6QHK4 219 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 ASB18Q6ZVZ8 466 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 MED25Q71SY5 747 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 MRGPREQ86SM8 312 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 KCNMB4Q86W47 210 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 MCATQ8IVS2 390 aaKnown RBP15.09■□□□□ 0.01
HDAC4-213ENST00000496347 TMEM102Q8N9M5 508 aaPredicted RBP15.09■□□□□ 0.01
HDAC4-213ENST00000496347 FBXO15Q8NCQ5 510 aaPredicted RBP15.09■□□□□ 0.01
HDAC4-213ENST00000496347 OR9A1PQ8NGU1 263 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 OR2Y1Q8NGV0 311 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 SMPDL3AQ92484 453 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 FBXO6Q9NRD1 293 aaPredicted RBP15.09■□□□□ 0.01
HDAC4-213ENST00000496347 IFT80Q9P2H3 777 aaPredicted RBP15.09■□□□□ 0.01
HDAC4-213ENST00000496347 ANKMY1Q9P2S6 941 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 DHCR7Q9UBM7 475 aaKnown RBP15.09■□□□□ 0.01
HDAC4-213ENST00000496347 TSR3Q9UJK0 312 aaKnown RBP15.09■□□□□ 0.01
HDAC4-213ENST00000496347 FBXO5Q9UKT4 447 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 G3BP2Q9UN86 482 aaKnown RBP15.09■□□□□ 0.01
HDAC4-213ENST00000496347 KLHL20Q9Y2M5 609 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 MED16Q9Y2X0 877 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 RELNP78509 3460 aa15.09■□□□□ 0.01
HDAC4-213ENST00000496347 TNRC6AQ8NDV7 1962 aaKnown RBP15.09■□□□□ 0.01
HDAC4-213ENST00000496347 MDC1Q14676 2089 aaKnown RBP15.08■□□□□ 0.01
HDAC4-213ENST00000496347 COL12A1Q99715 3063 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 A0A1W2PPV9 198 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 FITM1A5D6W6 292 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 KRT87PA6NCN2 255 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 ARGFXA6NJG6 315 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 SMAPO00193 183 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 CCNDBP1O95273 360 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 FOLR3P41439 243 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 GRIA3P42263 894 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 GNG11P61952 73 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 MORF4L2Q15014 288 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 C1orf189Q5VU69 101 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 ZNF549Q6P9A3 640 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 KIAA0408Q6ZU52 694 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 RNF44Q7L0R7 432 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 CNTN4Q8IWV2 1026 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 TTC29Q8NA56 475 aaPredicted RBP15.08■□□□□ 0
HDAC4-213ENST00000496347 OR2A1Q8NGT9 310 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 CD200R1Q8TD46 325 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 NAPGQ99747 312 aaPredicted RBP15.08■□□□□ 0
HDAC4-213ENST00000496347 MIPEPQ99797 713 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 SLC25A23Q9BV35 468 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 MLXIPLQ9NP71 852 aa15.08■□□□□ 0
HDAC4-213ENST00000496347 OR2A25A4D2G3 310 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 DSCR3O14972 297 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 SRPX2O60687 465 aaPredicted RBP15.07■□□□□ 0
HDAC4-213ENST00000496347 CTSVO60911 334 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 VPS26AO75436 327 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 CEACAM4O75871 244 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 IGHEP01854 428 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 CTSBP07858 339 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 MPC1LP0DKB6 136 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 CMPK1P30085 196 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 MPP1Q00013 466 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 DR1Q01658 176 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 KCNC4Q03721 635 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 CUL1Q13616 776 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 ATP1A4Q13733 1029 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 HSP90AA5PQ58FG0 334 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 SPANXN3Q5MJ09 141 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 FAM69BQ5VUD6 431 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 MRPL14Q6P1L8 145 aaKnown RBP15.07■□□□□ 0
HDAC4-213ENST00000496347 GALNT7Q86SF2 657 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 C2CD4AQ8NCU7 369 aaPredicted RBP15.07■□□□□ 0
HDAC4-213ENST00000496347 INPP5DQ92835 1189 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 GPR21Q99679 349 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 EBNA1BP2Q99848 306 aaKnown RBP15.07■□□□□ 0
HDAC4-213ENST00000496347 WDR54Q9H977 334 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 CUTCQ9NTM9 273 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 GALPQ9UBC7 116 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 NXT1Q9UKK6 140 aaKnown RBP15.07■□□□□ 0
HDAC4-213ENST00000496347 DHRS7Q9Y394 339 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 PTRH2Q9Y3E5 179 aaKnown RBP15.07■□□□□ 0
HDAC4-213ENST00000496347 PCDHGB7Q9Y5F8 929 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 SAR1BQ9Y6B6 198 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 PCSK5Q92824 1860 aa15.07■□□□□ 0
HDAC4-213ENST00000496347 CCDC188H7C350 402 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 PYCARD-AS1I3L0S3 204 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 SLC16A8O95907 504 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 ONECUT2O95948 504 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 PIM1P11309 404 aaPredicted RBP15.06■□□□□ 0
HDAC4-213ENST00000496347 NR1D1P20393 614 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 OTX2P32243 289 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 RPA3P35244 121 aaPredicted RBP15.06■□□□□ 0
HDAC4-213ENST00000496347 DHX9Q08211 1270 aaKnown RBP15.06■□□□□ 0
HDAC4-213ENST00000496347 CHAF1BQ13112 559 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms