RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 TMEM31Q5JXX7 168 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 PLEKHS1Q5SXH7 462 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 GLYATQ6IB77 296 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 DUS1LQ6P1R4 473 aaKnown RBP10.08□□□□□ -0.8
SAMM50-206ENST00000494795 HID1Q8IV36 788 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 PLPP6Q8IY26 295 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 MCOLN3Q8TDD5 553 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 ZNF480Q8WV37 535 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 FIG4Q92562 907 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 OR52E6Q96RD3 313 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 THUMPD3Q9BV44 507 aaKnown RBP10.08□□□□□ -0.8
SAMM50-206ENST00000494795 CCM2LQ9NUG4 571 aaPredicted RBP10.08□□□□□ -0.8
SAMM50-206ENST00000494795 ACTR3BQ9P1U1 418 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 SLC9A3R1O14745 358 aaPredicted RBP10.08□□□□□ -0.8
SAMM50-206ENST00000494795 MID1O15344 667 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 LZTS3O60299 673 aaPredicted RBP10.08□□□□□ -0.8
SAMM50-206ENST00000494795 PSIP1O75475 530 aaKnown RBP10.08□□□□□ -0.8
SAMM50-206ENST00000494795 PCCBP05166 539 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 C8GP07360 202 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 SRPRAP08240 638 aaKnown RBP10.08□□□□□ -0.8
SAMM50-206ENST00000494795 SMIM18P0DKX4 95 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 ETS2P15036 469 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 ATP6V1B1P15313 513 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 IRF8Q02556 426 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 STARD3Q14849 445 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 ERAP2Q6P179 960 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 GCNT7Q6ZNI0 430 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 RASGRP3Q8IV61 690 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 CLECL1Q8IZS7 167 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 MMP21Q8N119 569 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 NUS1Q96E22 293 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 PPP3R2Q96LZ3 170 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 TRIM54Q9BYV2 358 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 CLMPQ9H6B4 373 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 PRM3Q9NNZ6 103 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 DNAJC11Q9NVH1 559 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 DKK3Q9UBP4 350 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 A0A0C4DFX4 3053 aa10.08□□□□□ -0.8
SAMM50-206ENST00000494795 GSTM1P09488 218 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 TCF3P15923 654 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 GSTM4Q03013 218 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 MAPKAPK3Q16644 382 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 FRG2Q64ET8 278 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 LCN8Q6JVE9 175 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 EFL1Q7Z2Z2 1120 aaKnown RBP10.07□□□□□ -0.8
SAMM50-206ENST00000494795 C11orf96Q7Z7L8 435 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 SATL1Q86VE3 508 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 FAM20CQ8IXL6 584 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 FBXO30Q8TB52 745 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 HIC2Q96JB3 615 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 RNF145Q96MT1 663 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 FRG2BQ96QU4 278 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 CCM2Q9BSQ5 444 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 SORBS1Q9BX66 1292 aaKnown RBP10.07□□□□□ -0.8
SAMM50-206ENST00000494795 TMEM121BQ9BXQ6 578 aaPredicted RBP10.07□□□□□ -0.8
SAMM50-206ENST00000494795 SCOCQ9UIL1 159 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 TMCO1Q9UM00 188 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 PLEKHM1Q9Y4G2 1056 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 WDFY4Q6ZS81 3184 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 NUP210Q8TEM1 1887 aaPredicted RBP10.07□□□□□ -0.8
SAMM50-206ENST00000494795 ACOX3O15254 700 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 ATG13O75143 517 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 PAPLNO95428 1278 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 RB1P06400 928 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 AMD1P17707 334 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 CYP2A7P20853 494 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 NFKBIAP25963 317 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 PTPN6P29350 595 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 PEX19P40855 299 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 RPS14P62263 151 aaKnown RBP10.07□□□□□ -0.8
SAMM50-206ENST00000494795 FGL2Q14314 439 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 TMEM214Q6NUQ4 689 aaKnown RBP10.07□□□□□ -0.8
SAMM50-206ENST00000494795 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.07□□□□□ -0.8
SAMM50-206ENST00000494795 ERMP1Q7Z2K6 904 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 TRMT11Q7Z4G4 463 aaKnown RBP10.07□□□□□ -0.8
SAMM50-206ENST00000494795 LEMD2Q8NC56 503 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 ADCY4Q8NFM4 1077 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 OR5AR1Q8NGP9 310 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 C19orf43Q9BQ61 176 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 DPH2Q9BQC3 489 aaPredicted RBP10.07□□□□□ -0.8
SAMM50-206ENST00000494795 OSBPL6Q9BZF3 934 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 BATF3Q9NR55 127 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.07□□□□□ -0.8
SAMM50-206ENST00000494795 SLC8A2Q9UPR5 921 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 EIF3LQ9Y262 564 aaKnown RBP10.07□□□□□ -0.8
SAMM50-206ENST00000494795 PCM1Q15154 2024 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 CFAP99D6REC4 459 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 H3BM21 787 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 POP7O75817 140 aaKnown RBP10.07□□□□□ -0.8
SAMM50-206ENST00000494795 KAT7O95251 611 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 C1orf105O95561 183 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 STATHP02808 62 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 MPC1LP0DKB6 136 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 ITGB7P26010 798 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 PLOD1Q02809 727 aaPredicted RBP10.07□□□□□ -0.8
SAMM50-206ENST00000494795 TFF2Q03403 129 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 ELAVL3Q14576 367 aaKnown RBP10.07□□□□□ -0.8
SAMM50-206ENST00000494795 ZBTB49Q6ZSB9 765 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 TMPRSS11BQ86T26 416 aa10.07□□□□□ -0.8
SAMM50-206ENST00000494795 NLRP8Q86W28 1048 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms