RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SLC31A1O15431 190 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 RGS14O43566 566 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 NRP2O60462 931 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 PEX11AO75192 247 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 PDYNP01213 254 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 RPN2P04844 631 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 C1GALT1C1LP0DN25 315 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 IL12AP29459 219 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 CD6P30203 668 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 GCKP35557 465 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 PGM1P36871 562 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 PIK3CBP42338 1070 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 BDKRB1P46663 353 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 ACTR3P61158 418 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 SLC25A3Q00325 362 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 TFF2Q03403 129 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 CHIT1Q13231 466 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 MAD2L1Q13257 205 aaPredicted RBP6.57□□□□□ -1.36
MSH5-217ENST00000494458 FASTKQ14296 549 aaKnown RBP6.57□□□□□ -1.36
MSH5-217ENST00000494458 CLCA4Q14CN2 919 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 ZRSR2Q15696 482 aaKnown RBP6.57□□□□□ -1.36
MSH5-217ENST00000494458 FXNQ16595 210 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 ZNF423Q2M1K9 1284 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 AP5B1Q2VPB7 878 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 ATP6AP1LQ52LC2 224 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 USP39Q53GS9 565 aaKnown RBP6.57□□□□□ -1.36
MSH5-217ENST00000494458 PIGGQ5H8A4 983 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 FRG2Q64ET8 278 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 NXNQ6DKJ4 435 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 CAPN13Q6MZZ7 669 aaPredicted RBP6.57□□□□□ -1.36
MSH5-217ENST00000494458 PAOXQ6QHF9 649 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 CRTC3Q6UUV7 619 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 IL27RAQ6UWB1 636 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 PRR23BQ6ZRT6 265 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 RETREG3Q86VR2 466 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 NRROSQ86YC3 692 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 RIMKLAQ8IXN7 391 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 DDIASQ8IXT1 998 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 SPEM1Q8N4L4 309 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 MINDY1Q8N5J2 469 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 DEFB123Q8N688 67 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 ENDOVQ8N8Q3 282 aaKnown RBP6.57□□□□□ -1.36
MSH5-217ENST00000494458 CADM4Q8NFZ8 388 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 OR5AR1Q8NGP9 310 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 GPBAR1Q8TDU6 330 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 CHTF18Q8WVB6 975 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 OR1E3Q8WZA6 343 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 KLK6Q92876 244 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 NEIL2Q969S2 332 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 ATP6V1E2Q96A05 226 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 ROPN1LQ96C74 230 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 CMTM7Q96FZ5 175 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 TEX37Q96LM6 180 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 PPP1R36Q96LQ0 422 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 WDR92Q96MX6 357 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 FRG2BQ96QU4 278 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 EFCAB11Q9BUY7 163 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 ACPTQ9BZG2 426 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 PCBD2Q9H0N5 130 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 RHBGQ9H310 441 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 C6orf106Q9H6K1 298 aaPredicted RBP6.57□□□□□ -1.36
MSH5-217ENST00000494458 KIR3DX1Q9H7L2 352 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 MVB12BQ9H7P6 319 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 ACTR8Q9H981 624 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 FARSBQ9NSD9 589 aaKnown RBP6.57□□□□□ -1.36
MSH5-217ENST00000494458 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.57□□□□□ -1.36
MSH5-217ENST00000494458 C1orf109Q9NX04 203 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 NDE1Q9NXR1 346 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 NOP53Q9NZM5 478 aaKnown RBP6.57□□□□□ -1.36
MSH5-217ENST00000494458 ABCD2Q9UBJ2 740 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 GIMAP2Q9UG22 337 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 SLC7A8Q9UHI5 535 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 NDRG2Q9UN36 371 aaKnown RBP6.57□□□□□ -1.36
MSH5-217ENST00000494458 NDUFAF1Q9Y375 327 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 FIS1Q9Y3D6 152 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 PRKAB1Q9Y478 270 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 ANGPTL3Q9Y5C1 460 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 PCDHGA7Q9Y5G6 932 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 PCDHGA11Q9Y5H2 935 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 GMEB1Q9Y692 573 aa6.57□□□□□ -1.36
MSH5-217ENST00000494458 PRUNE2Q8WUY3 3088 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 ATG2BQ96BY7 2078 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 IGHV1OR15-9A0A0B4J2B8 117 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 CCDC163A0A0D9SF12 145 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 SPTY2D1-AS1A0A0U1RR47 76 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 A0A1W2PR77 199 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 ASPDHA6ND91 283 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 FAM170BA6NMN3 283 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 ZNF839A8K0R7 811 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 METTL12A8MUP2 240 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 E7EQ34 232 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 FXYD1O00168 92 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 CLGNO14967 610 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 PRMT3O60678 531 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 EEDO75530 441 aaKnown RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 CRCPO75575 148 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 SLC22A3O75751 556 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 KLHL18O94889 574 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 TBX6O95947 436 aaPredicted RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 G6PDP11413 515 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms