RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 CDHR3Q6ZTQ4 885 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 RAPH1Q70E73 1250 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 TMEM126BQ8IUX1 230 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 EIF1ADQ8N9N8 165 aaKnown RBP12.31□□□□□ -0.44
CLIP2-209ENST00000493166 OR2L3Q8NG85 312 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 OR2A1Q8NGT9 310 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 OR8K5Q8NH50 307 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 UHMK1Q8TAS1 419 aaKnown RBP12.31□□□□□ -0.44
CLIP2-209ENST00000493166 ANKRD49Q8WVL7 239 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 ANKRD7Q92527 254 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 ZNF501Q96CX3 271 aaPredicted RBP12.31□□□□□ -0.44
CLIP2-209ENST00000493166 RNF31Q96EP0 1072 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 FCRL4Q96PJ5 515 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 ACAT2Q9BWD1 397 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 CHRNA10Q9GZZ6 450 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 FAM60AQ9NP50 221 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 ABCF3Q9NUQ8 709 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 ARL15Q9NXU5 204 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 STOX2Q9P2F5 926 aaPredicted RBP12.31□□□□□ -0.44
CLIP2-209ENST00000493166 PILRAQ9UKJ1 303 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 KLHL20Q9Y2M5 609 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 TMEM184BQ9Y519 407 aaPredicted RBP12.31□□□□□ -0.44
CLIP2-209ENST00000493166 IKBKGQ9Y6K9 419 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 FER1L5A0AVI2 2057 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 LOC400499M0QZD8 3231 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 CHD6Q8TD26 2715 aa12.31□□□□□ -0.44
CLIP2-209ENST00000493166 PKD1L2Q7Z442 2459 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 E7ENX8 843 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 CDC7O00311 574 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 RAD1O60671 282 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 SCRG1O75711 98 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 CCNDBP1O95273 360 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 WISP3O95389 354 aaPredicted RBP12.3□□□□□ -0.44
CLIP2-209ENST00000493166 TIAF1O95411 115 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 INHBAP08476 426 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 FAM153BP0C7A2 387 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 CCDC166P0CW27 439 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 ZNF28P17035 718 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 ITPKBP27987 946 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 TBPL1P62380 186 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 TAP2Q03519 686 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 TLE3Q04726 772 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 BMPR2Q13873 1038 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 NAA25Q14CX7 972 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 ZKSCAN8Q15776 578 aaPredicted RBP12.3□□□□□ -0.44
CLIP2-209ENST00000493166 FAM153CQ494X1 144 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 MROH9Q5TGP6 573 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 PWWP2BQ6NUJ5 590 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 FIGLAQ6QHK4 219 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 SBSNQ6UWP8 590 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 FRA10AC1Q70Z53 315 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 TRMT10CQ7L0Y3 403 aaKnown RBP12.3□□□□□ -0.44
CLIP2-209ENST00000493166 TAOK1Q7L7X3 1001 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 CMC1Q7Z7K0 106 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 DTX1Q86Y01 620 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 CACNA2D3Q8IZS8 1091 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 NLGN4XQ8N0W4 816 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 IL22RA1Q8N6P7 574 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 NLGN4YQ8NFZ3 816 aaPredicted RBP12.3□□□□□ -0.44
CLIP2-209ENST00000493166 HNRNPLLQ8WVV9 542 aaKnown RBP12.3□□□□□ -0.44
CLIP2-209ENST00000493166 MED8Q96G25 268 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 DERL2Q9GZP9 239 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 MRPS30Q9NP92 439 aaKnown RBP12.3□□□□□ -0.44
CLIP2-209ENST00000493166 CCDC177Q9NQR7 707 aaPredicted RBP12.3□□□□□ -0.44
CLIP2-209ENST00000493166 CTNNAL1Q9UBT7 734 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 TAC3Q9UHF0 121 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 SERTAD3Q9UJW9 196 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 IKZF3Q9UKT9 509 aa12.3□□□□□ -0.44
CLIP2-209ENST00000493166 NOVA2Q9UNW9 492 aaKnown RBP12.3□□□□□ -0.44
CLIP2-209ENST00000493166 CCDC88CQ9P219 2028 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 TEX51A0A1B0GUA7 166 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 TARM1B6A8C7 271 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 POC1B-GALNT4F8VUJ3 575 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 RIPK2O43353 540 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 CPNE3O75131 537 aaKnown RBP12.29□□□□□ -0.44
CLIP2-209ENST00000493166 GUCA1CO95843 209 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 DLGAP3O95886 979 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 ABHD2P08910 425 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 TNFRSF8P28908 595 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 CRABP2P29373 138 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 DEKP35659 375 aaKnown RBP12.29□□□□□ -0.44
CLIP2-209ENST00000493166 GRIA3P42263 894 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 UCNP55089 124 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 ITGA1P56199 1179 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 MAP7Q14244 749 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 TSNQ15631 228 aaKnown RBP12.29□□□□□ -0.44
CLIP2-209ENST00000493166 PPP1R3AQ16821 1122 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 MANEAQ5SRI9 462 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 PRAMEF13Q5VWM6 474 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 ICE2Q659A1 982 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 FCRL6Q6DN72 434 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 AGTRAPQ6RW13 159 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 C6orf15Q6UXA7 325 aaPredicted RBP12.29□□□□□ -0.44
CLIP2-209ENST00000493166 TIPARPQ7Z3E1 657 aaKnown RBP12.29□□□□□ -0.44
CLIP2-209ENST00000493166 ADAMTSL2Q86TH1 951 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 TBC1D1Q86TI0 1168 aaPredicted RBP12.29□□□□□ -0.44
CLIP2-209ENST00000493166 VASH2Q86V25 355 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 GPR135Q8IZ08 494 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 DNAJC22Q8N4W6 341 aa12.29□□□□□ -0.44
CLIP2-209ENST00000493166 GALNT6Q8NCL4 622 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms