RNA–Protein interactions for RNA: ENST00000491519.4

SATB1-216, Transcript of SATB homeobox 1, humanhuman

TSL 2 BASIC

Gene SATB1, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-216ENST00000491519 HSPB3Q12988 150 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 PPP2R5CQ13362 524 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 NR1D2Q14995 579 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 TNIP1Q15025 636 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 PKN2Q16513 984 aaKnown RBP3.72□□□□□ -1.81
SATB1-216ENST00000491519 FAM76BQ5HYJ3 339 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 RNASEH2BQ5TBB1 312 aaKnown RBP3.72□□□□□ -1.81
SATB1-216ENST00000491519 FAM109BQ6ICB4 259 aaPredicted RBP3.72□□□□□ -1.81
SATB1-216ENST00000491519 PRSS57Q6UWY2 283 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 FAM47EQ6ZV65 393 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 Q75L30 129 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 SLFN11Q7Z7L1 901 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 IQCF2Q8IXL9 164 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 SLC4A11Q8NBS3 891 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 MNS1Q8NEH6 495 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 Q8NFD4 153 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 MRPS27Q92552 414 aaKnown RBP3.72□□□□□ -1.81
SATB1-216ENST00000491519 MTERF3Q96E29 417 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 SIPA1Q96FS4 1042 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 LINC00615Q96LM1 132 aaPredicted RBP3.72□□□□□ -1.81
SATB1-216ENST00000491519 ZNF582Q96NG8 517 aaPredicted RBP3.72□□□□□ -1.81
SATB1-216ENST00000491519 OLFM1Q99784 485 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 NUP85Q9BW27 656 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 KRTAP4-3Q9BYR4 195 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 WNT5BQ9H1J7 359 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 CNOT10Q9H9A5 744 aaKnown RBP3.72□□□□□ -1.81
SATB1-216ENST00000491519 LRRC4Q9HBW1 653 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 EQTNQ9NQ60 294 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 PFDN4Q9NQP4 134 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 MBNL1Q9NR56 388 aaKnown RBP3.72□□□□□ -1.81
SATB1-216ENST00000491519 NPAP1Q9NZP6 1156 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 TUBE1Q9UJT0 475 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 RALYQ9UKM9 306 aaKnown RBP3.72□□□□□ -1.81
SATB1-216ENST00000491519 GTF3C4Q9UKN8 822 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.72□□□□□ -1.81
SATB1-216ENST00000491519 CACNA1AO00555 2505 aa3.72□□□□□ -1.81
SATB1-216ENST00000491519 SBF1O95248 1867 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 SAA2-SAA4A0A096LPE2 208 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 ZCWPW2A0A1B0GU75 182 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 PRSS51A0A1B0GVH4 220 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 ANKUB1A6NFN9 424 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 MPHOSPH10O00566 681 aaKnown RBP3.71□□□□□ -1.82
SATB1-216ENST00000491519 MEIS2O14770 477 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 MED24O75448 989 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 SLCO2B1O94956 709 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 TFAP2AP05549 437 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 MMP10P09238 476 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 FAM106CPP0CH98 169 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 CDH1P12830 882 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 STMN1P16949 149 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 GM2AP17900 193 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 PCGF2P35227 344 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 SLC9A3P48764 834 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 ZNF41P51814 821 aaPredicted RBP3.71□□□□□ -1.82
SATB1-216ENST00000491519 ERVFC1-1P60608 527 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 TROAPQ12815 778 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 KIF5AQ12840 1032 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 COX10Q12887 443 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 ZBTB17Q13105 803 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 SNTA1Q13424 505 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 KRT39Q6A163 491 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 KLC3Q6P597 504 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 FAM171BQ6P995 826 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 UNQ6126/PRO20091Q6UXV3 157 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 UNC5DQ6UXZ4 953 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 PTOV1Q86YD1 416 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 MUC20Q8N307 709 aaPredicted RBP3.71□□□□□ -1.82
SATB1-216ENST00000491519 ZNF441Q8N8Z8 693 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 PAPD5Q8NDF8 572 aaKnown RBP3.71□□□□□ -1.82
SATB1-216ENST00000491519 OR2AJ1Q8NGZ0 328 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 BBS10Q8TAM1 723 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 SPATA18Q8TC71 538 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 SMPDL3BQ92485 455 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 SNX21Q969T3 373 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 SLAMF9Q96A28 289 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 OXNAD1Q96HP4 312 aaPredicted RBP3.71□□□□□ -1.82
SATB1-216ENST00000491519 DUX5Q96PT3 197 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 NAA11Q9BSU3 229 aaPredicted RBP3.71□□□□□ -1.82
SATB1-216ENST00000491519 CSTL1Q9H114 145 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 SLA2Q9H6Q3 261 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 YY1AP1Q9H869 796 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 ANKZF1Q9H8Y5 726 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 TBC1D17Q9HA65 648 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 TRPC7Q9HCX4 862 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 MIOSQ9NXC5 875 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 HOXC10Q9NYD6 342 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 UTP6Q9NYH9 597 aaKnown RBP3.71□□□□□ -1.82
SATB1-216ENST00000491519 RHCGQ9UBD6 479 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 SUN2Q9UH99 717 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 PCSK1NQ9UHG2 260 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 ANAPC5Q9UJX4 755 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 BLOC1S6Q9UL45 172 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 SZT2Q5T011 3432 aa3.71□□□□□ -1.82
SATB1-216ENST00000491519 BRCA1P38398 1863 aaKnown RBP3.71□□□□□ -1.82
SATB1-216ENST00000491519 ANKARQ7Z5J8 1434 aa3.7□□□□□ -1.82
SATB1-216ENST00000491519 ABCC6O95255 1503 aa3.7□□□□□ -1.82
SATB1-216ENST00000491519 KIF13BQ9NQT8 1826 aa3.7□□□□□ -1.82
SATB1-216ENST00000491519 ARFGEF1Q9Y6D6 1849 aa3.7□□□□□ -1.82
SATB1-216ENST00000491519 IGHV4OR15-8A0A075B7B6 117 aa3.7□□□□□ -1.82
SATB1-216ENST00000491519 ELOVL7A1L3X0 281 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms