RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 OTUD6BQ8N6M0 293 aa17.02■□□□□ 0.32
YIPF3-208ENST00000490447 MAGEC3Q8TD91 643 aa17.02■□□□□ 0.32
YIPF3-208ENST00000490447 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.02■□□□□ 0.32
YIPF3-208ENST00000490447 BARD1Q99728 777 aaKnown RBP17.02■□□□□ 0.32
YIPF3-208ENST00000490447 DESI2Q9BSY9 194 aa17.02■□□□□ 0.32
YIPF3-208ENST00000490447 CTSFQ9UBX1 484 aa17.02■□□□□ 0.32
YIPF3-208ENST00000490447 NTNG1Q9Y2I2 539 aa17.02■□□□□ 0.32
YIPF3-208ENST00000490447 CSAG2Q9Y5P2 127 aa17.02■□□□□ 0.32
YIPF3-208ENST00000490447 MAU2Q9Y6X3 613 aa17.02■□□□□ 0.32
YIPF3-208ENST00000490447 NDUFS3O75489 264 aa17.01■□□□□ 0.31
YIPF3-208ENST00000490447 ERVK-10P10266 1014 aa17.01■□□□□ 0.31
YIPF3-208ENST00000490447 DCTP40126 519 aa17.01■□□□□ 0.31
YIPF3-208ENST00000490447 CCNFP41002 786 aa17.01■□□□□ 0.31
YIPF3-208ENST00000490447 CARSP49589 748 aaKnown RBP17.01■□□□□ 0.31
YIPF3-208ENST00000490447 OCA2Q04671 838 aa17.01■□□□□ 0.31
YIPF3-208ENST00000490447 ZNF169Q14929 603 aaPredicted RBP17.01■□□□□ 0.31
YIPF3-208ENST00000490447 PCID2Q5JVF3 399 aa17.01■□□□□ 0.31
YIPF3-208ENST00000490447 KIRREL2Q6UWL6 708 aa17.01■□□□□ 0.31
YIPF3-208ENST00000490447 C1orf54Q8WWF1 131 aa17.01■□□□□ 0.31
YIPF3-208ENST00000490447 THOC3Q96J01 351 aaKnown RBP17.01■□□□□ 0.31
YIPF3-208ENST00000490447 MIPEPQ99797 713 aa17.01■□□□□ 0.31
YIPF3-208ENST00000490447 CRB3Q9BUF7 120 aa17.01■□□□□ 0.31
YIPF3-208ENST00000490447 ZNF304Q9HCX3 659 aa17.01■□□□□ 0.31
YIPF3-208ENST00000490447 CHRAC1Q9NRG0 131 aa17.01■□□□□ 0.31
YIPF3-208ENST00000490447 CAPN6Q9Y6Q1 641 aa17.01■□□□□ 0.31
YIPF3-208ENST00000490447 MYO9AB2RTY4 2548 aa17.01■□□□□ 0.31
YIPF3-208ENST00000490447 HIVEP3Q5T1R4 2406 aa17.01■□□□□ 0.31
YIPF3-208ENST00000490447 HYKKA2RU49 373 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 FITM1A5D6W6 292 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 C1orf105O95561 183 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 EIF2S1P05198 315 aaKnown RBP17■□□□□ 0.31
YIPF3-208ENST00000490447 ETS1P14921 441 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 PSMB5P28074 263 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 TSFMP43897 325 aaKnown RBP17■□□□□ 0.31
YIPF3-208ENST00000490447 BDKRB1P46663 353 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 SESN2P58004 480 aaPredicted RBP17■□□□□ 0.31
YIPF3-208ENST00000490447 SNX1Q13596 522 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 NAA25Q14CX7 972 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 TLR1Q15399 786 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 WASHC2DQ5SRD0 308 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 B3GNTL1Q67FW5 361 aaPredicted RBP17■□□□□ 0.31
YIPF3-208ENST00000490447 CNSTQ6PJW8 725 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 IGFL2Q6UWQ7 119 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 LRRC6Q86X45 466 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 MPP5Q8N3R9 675 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 OR11G2Q8NGC1 345 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 ZNF285Q96NJ3 590 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 MARCH4Q9P2E8 410 aaPredicted RBP17■□□□□ 0.31
YIPF3-208ENST00000490447 ZNF282Q9UDV7 671 aaPredicted RBP17■□□□□ 0.31
YIPF3-208ENST00000490447 ZC3H7BQ9UGR2 993 aaKnown RBP17■□□□□ 0.31
YIPF3-208ENST00000490447 NFS1Q9Y697 457 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 CENPEQ02224 2701 aa17■□□□□ 0.31
YIPF3-208ENST00000490447 A0A0J9YVX5 310 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 A0A0U1RQJ8 604 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 ENO4A6NNW6 628 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 AP3B1O00203 1094 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 MAP2K7O14733 419 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 PFDN6O15212 129 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 CTSVO60911 334 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 ACPPP15309 386 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 EIF3BP55884 814 aaKnown RBP16.99■□□□□ 0.31
YIPF3-208ENST00000490447 PER3P56645 1201 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 FRMPD2BQ6IN97 320 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 PRMT9Q6P2P2 845 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 LINC00696Q6ZRV3 163 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 PRUNE1Q86TP1 453 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 KCNMB4Q86W47 210 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 SLC13A5Q86YT5 568 aaPredicted RBP16.99■□□□□ 0.31
YIPF3-208ENST00000490447 OR2L3Q8NG85 312 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 HMGCLL1Q8TB92 370 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 GRHL3Q8TE85 626 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 MIEF2Q96C03 454 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 IL22Q9GZX6 179 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 P2RY12Q9H244 342 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 ENAMQ9NRM1 1142 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 CRYBG3Q68DQ2 2970 aa16.99■□□□□ 0.31
YIPF3-208ENST00000490447 VSTM2BA6NLU5 285 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 PRICKLE3O43900 615 aaPredicted RBP16.98■□□□□ 0.31
YIPF3-208ENST00000490447 UQCRHP07919 91 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 EDN3P14138 238 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 RPS3P23396 243 aaKnown RBP eCLIP16.98■□□□□ 0.318e-8■■■□□ 16.1
YIPF3-208ENST00000490447 CMPK1P30085 196 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 BASP1P80723 227 aaKnown RBP16.98■□□□□ 0.31
YIPF3-208ENST00000490447 KLC1Q07866 573 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 MUM1Q2TAK8 710 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 FAM180AQ6UWF9 173 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 ISLR2Q6UXK2 745 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 PRSS58Q8IYP2 241 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 RNF10Q8N5U6 811 aaKnown RBP16.98■□□□□ 0.31
YIPF3-208ENST00000490447 STT3BQ8TCJ2 826 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 FAR1Q8WVX9 515 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 CABS1Q96KC9 395 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 ZFYVE21Q9BQ24 234 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 ZNF160Q9HCG1 818 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 BFARQ9NZS9 450 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 SPATA7Q9P0W8 599 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 TSR3Q9UJK0 312 aaKnown RBP16.98■□□□□ 0.31
YIPF3-208ENST00000490447 C3orf18Q9UK00 162 aa16.98■□□□□ 0.31
YIPF3-208ENST00000490447 RUVBL2Q9Y230 463 aaKnown RBP16.98■□□□□ 0.31
YIPF3-208ENST00000490447 CELSR2Q9HCU4 2923 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms