RNA–Protein interactions for RNA: ENST00000488474.1

PRKAR1B-210, Transcript of protein kinase cAMP-dependent type I regulatory subunit beta, human

TSL 3

Gene PRKAR1B, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1B-210	ENST00000488474	ATRX	P46100	2492 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474		B8ZZF3	427 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	TERT	O14746	1132 aa	Known RBP	13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	C1QL1	O75973	258 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	C8G	P07360	202 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	MCM3	P25205	808 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	IVD	P26440	423 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	RORA	P35398	523 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	DCD	P81605	110 aa	Known RBP	13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	MGAT5	Q09328	741 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	ZIC1	Q15915	447 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	MSS51	Q4VC12	460 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	ATP1A1-AS1	Q5TC04	95 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	PRAMEF17	Q5VTA0	474 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	UBE2R2	Q712K3	238 aa	Predicted RBP	13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	PRICKLE2	Q7Z3G6	844 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	MCAT	Q8IVS2	390 aa	Known RBP	13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	DNAJC22	Q8N4W6	341 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	EXD3	Q8N9H8	876 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	FBXO36	Q8NEA4	188 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	SPATA4	Q8NEY3	305 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	OR2L3	Q8NG85	312 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	CDKL2	Q92772	493 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	NDN	Q99608	321 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	ACAT2	Q9BWD1	397 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	TRIM54	Q9BYV2	358 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	COL6A6	A6NMZ7	2263 aa		13.69	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	LOC400499	M0QZD8	3231 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474		A0A1B0GX78	115 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	SRPX2	O60687	465 aa	Predicted RBP	13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	ERG	P11308	486 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	HIST1H2AD	P20671	130 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	ALAS2	P22557	587 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	PSMB5	P28074	263 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	FOLR3	P41439	243 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	RPL21	P46778	160 aa	Known RBP	13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	PMS2	P54278	862 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	RPS18	P62269	152 aa	Known RBP	13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	ABAT	P80404	500 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	C2orf54	Q08AI8	447 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	FRG1	Q14331	258 aa	Known RBP	13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	FAM214A	Q32MH5	1076 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	CCSMST1	Q4G0I0	132 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	LACTB2	Q53H82	288 aa	Predicted RBP	13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	C1orf189	Q5VU69	101 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	MLIP	Q5VWP3	458 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	STEAP4	Q687X5	459 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	ZNF549	Q6P9A3	640 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	FAM198B	Q6UWH4	519 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	ZNF517	Q6ZMY9	492 aa	Predicted RBP	13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	ADCK2	Q7Z695	626 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	ANKMY2	Q8IV38	441 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	FAM20C	Q8IXL6	584 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	ZBED8	Q8IZ13	594 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	GIMAP7	Q8NHV1	300 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	ASB11	Q8WXH4	323 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	RERG	Q96A58	199 aa	Predicted RBP	13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	LINGO1	Q96FE5	620 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	HIST1H2AH	Q96KK5	128 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	IP6K3	Q96PC2	410 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	PKP4	Q99569	1192 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	HIST1H2AJ	Q99878	128 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	ERP44	Q9BS26	406 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	H2AFJ	Q9BTM1	129 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	SEMA4C	Q9C0C4	833 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	SPRTN	Q9H040	489 aa	Predicted RBP	13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	PCBD2	Q9H0N5	130 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	DPH5	Q9H2P9	285 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	CCDC177	Q9NQR7	707 aa	Predicted RBP	13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	ACSS2	Q9NR19	701 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	ABCF3	Q9NUQ8	709 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	WHRN	Q9P202	907 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	GALP	Q9UBC7	116 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	TAC3	Q9UHF0	121 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	TCFL5	Q9UL49	500 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	KLHL20	Q9Y2M5	609 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	SNX24	Q9Y343	169 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	TEX264	Q9Y6I9	313 aa		13.68	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	EIF3H	O15372	352 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	SLC28A2	O43868	658 aa		13.67	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	SLC16A8	O95907	504 aa		13.67	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	IGHE	P01854	428 aa		13.67	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	F7	P08709	466 aa	Predicted RBP	13.67	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	ATXN8OS	P0DMR3	200 aa		13.67	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	GRIA3	P42263	894 aa		13.67	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	GABRA4	P48169	554 aa		13.67	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	SLC12A2	P55011	1212 aa		13.67	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	RRAD	P55042	308 aa		13.67	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	VSX2	P58304	361 aa	Predicted RBP	13.67	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	IL2	P60568	153 aa		13.67	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	CAV1	Q03135	178 aa		13.67	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	TEDDM1	Q5T9Z0	273 aa		13.67	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	SUSD1	Q6UWL2	747 aa		13.67	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	SLC38A9	Q8NBW4	561 aa		13.67	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	PYROXD1	Q8WU10	500 aa		13.67	□□□□□ -0.22
PRKAR1B-210	ENST00000488474	VPS39	Q96JC1	886 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms