RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 CEACAM20Q6UY09 585 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 MEX3BQ6ZN04 569 aaKnown RBP3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 ZNF554Q86TJ5 538 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 FAM72BQ86X60 149 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 VSIG1Q86XK7 387 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 PLD3Q8IV08 490 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 FOXP4Q8IVH2 680 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 ZNF595Q8IYB9 648 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 CNBD1Q8NA66 436 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 KLHDC9Q8NEP7 349 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 OR6J1Q8NGC5 347 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 OR10V1Q8NGI7 309 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 SPDL1Q96EA4 605 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 NSL1Q96IY1 281 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 SGK494Q96LW2 274 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 SFXN2Q96NB2 322 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 DESI2Q9BSY9 194 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 NUP85Q9BW27 656 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 GPR88Q9GZN0 384 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 SUDS3Q9H7L9 328 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 PELI2Q9HAT8 420 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 HOMER3Q9NSC5 361 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 WDR35Q9P2L0 1181 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 CLIP2Q9UDT6 1046 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 SLC24A2Q9UI40 661 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 TUBE1Q9UJT0 475 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 ANAPC5Q9UJX4 755 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 FLT1P17948 1338 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 DISP1Q96F81 1524 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 CEP170Q5SW79 1584 aa3.58□□□□□ -1.84
ECHDC1-217ENST00000488087 PRR32B1ATL7 298 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 E9PI62 339 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 PLOD2O00469 737 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 PES1O00541 588 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 KDM6BO15054 1643 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 LINC01565O15544 149 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 RTN2O75298 545 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 RECQL5O94762 991 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 INHBAP08476 426 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 PZPP20742 1482 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 SLC8A3P57103 927 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 DMPKQ09013 629 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 TFCP2Q12800 502 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 KRBOX4Q5JUW0 171 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 CCDC158Q5M9N0 1113 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 WLSQ5T9L3 541 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 AP1ARQ63HQ0 302 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 PLA2G4FQ68DD2 849 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 SLC35E4Q6ICL7 350 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 RBMS3Q6XE24 437 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 USP43Q70EL4 1123 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 ERN2Q76MJ5 926 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 MARK2Q7KZI7 788 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 CENPVQ7Z7K6 275 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 TRPT1Q86TN4 253 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 PLA2G4DQ86XP0 818 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 MFN1Q8IWA4 741 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 ZBTB8BQ8NAP8 495 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 DRAXINQ8NBI3 349 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 NEK11Q8NG66 645 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 CCDC26Q8TAB7 109 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 GRAPLQ8TC17 118 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 TMEM143Q96AN5 459 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 SLC47A1Q96FL8 570 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 HES6Q96HZ4 224 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 SPAG5Q96R06 1193 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 EGFL8Q99944 293 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 RTP3Q9BQQ7 232 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 CNOT10Q9H9A5 744 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 BATF3Q9NR55 127 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 TXLNGQ9NUQ3 528 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 COQ3Q9NZJ6 369 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 C5AR2Q9P296 337 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 ACAD8Q9UKU7 415 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 TCF19Q9Y242 345 aa3.57□□□□□ -1.84
ECHDC1-217ENST00000488087 TCF20Q9UGU0 1960 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 ABCA10Q8WWZ4 1543 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 GRIN2BQ13224 1484 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 ATAD2BQ9ULI0 1458 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 NUP160Q12769 1436 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 SOS1Q07889 1333 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 IL16Q14005 1332 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 PHLPP2Q6ZVD8 1323 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 A0A0G2JLW4 131 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 PMS2P5A8MQ11 134 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 SMIM1B2RUZ4 78 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 C19orf81C9J6K1 198 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 PDLIM1O00151 329 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 GAPDHSO14556 408 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 CHUKO15111 745 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 GRID2O43424 1007 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 KINO60870 393 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 DIAPH2O60879 1101 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 TADA2AO75478 443 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 C22orf31O95567 290 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 HSPA4LO95757 839 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 TSHBP01222 138 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 DANCRP0C864 163 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 IGHV4-38-2P0DP08 117 aa3.56□□□□□ -1.84
ECHDC1-217ENST00000488087 MUTP22033 750 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms