RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 GNPTGQ9UJJ9 305 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 FOXD3Q9UJU5 478 aaPredicted RBP5.53□□□□□ -1.52
CUX1-208ENST00000485792 CDC23Q9UJX2 597 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 FBXO5Q9UKT4 447 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 DHRS7Q9Y394 339 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 COMMD10Q9Y6G5 202 aa5.53□□□□□ -1.52
CUX1-208ENST00000485792 RP1L1Q8IWN7 2480 aaPredicted RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 HIVEP3Q5T1R4 2406 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 IGKV1-8A0A0C4DH67 115 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 UBA6A0AVT1 1052 aaPredicted RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 HMX2A2RU54 273 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 CXorf49A8MYA2 514 aaPredicted RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 SHISA8B8ZZ34 492 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 MYO1CO00159 1063 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 IFRD1O00458 451 aaPredicted RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 EIF3HO15372 352 aaKnown RBP eCLIP5.52□□□□□ -1.53
CUX1-208ENST00000485792 CNOT3O75175 753 aaKnown RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 NDUFS3O75489 264 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 HAUS5O94927 633 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 FKBP9O95302 570 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 C1orf105O95561 183 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 ZBTB11O95625 1053 aaPredicted RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 APOA4P06727 396 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 FURINP09958 794 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 FOLR1P15328 257 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 PAMP19021 973 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 PKLRP30613 574 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 CSTF2P33240 577 aaKnown RBP eCLIP5.52□□□□□ -1.53
CUX1-208ENST00000485792 ELK3P41970 407 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 SKIV2L2P42285 1042 aaKnown RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 PAFAH1B1P43034 410 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 RAB28P51157 221 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 CSE1LP55060 971 aaKnown RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 UCNP55089 124 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 CDKN2DP55273 166 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 GPX6P59796 221 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 HSD11B2P80365 405 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 RELAQ04206 551 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 CTBP1Q13363 440 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 CUL1Q13616 776 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 TUBB2AQ13885 445 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 FASTKQ14296 549 aaKnown RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 BRD3Q15059 726 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 PPP1R7Q15435 360 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 HSP90AA5PQ58FG0 334 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 PHF19Q5T6S3 580 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 ATP1A1-AS1Q5TC04 95 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 ANKS6Q68DC2 871 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 CNSTQ6PJW8 725 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 CEACAM20Q6UY09 585 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 MBOAT1Q6ZNC8 495 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 SDCCAG8Q86SQ7 713 aaPredicted RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 AMIGO1Q86WK6 493 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 TRIM48Q8IWZ4 208 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 PDIK1LQ8N165 341 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 TMEM151AQ8N4L1 468 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 ARHGEF39Q8N4T4 335 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 MMGT1Q8N4V1 131 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 OR2L8Q8NGY9 312 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 OR8K5Q8NH50 307 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 CD200R1Q8TD46 325 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 ANKRD7Q92527 254 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 TTC9Q92623 222 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 ZNF669Q96BR6 464 aaPredicted RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 CERS2Q96G23 380 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 AHCYL2Q96HN2 611 aaKnown RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 NAF1Q96HR8 494 aaKnown RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 C16orf45Q96MC5 204 aaPredicted RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 NSUN5Q96P11 429 aaKnown RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 TRAPPC9Q96Q05 1148 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 KRT12Q99456 494 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 NDNQ99608 321 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 OLFM1Q99784 485 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 CTRCQ99895 268 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 AARSD1Q9BTE6 412 aaKnown RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 HGH1Q9BTY7 390 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 TUBB2BQ9BVA1 445 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 SLC12A9Q9BXP2 914 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 FUT8Q9BYC5 575 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 KLHL25Q9H0H3 589 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 CPNE5Q9HCH3 593 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 SYTL2Q9HCH5 934 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 FAM60AQ9NP50 221 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 FBXO6Q9NRD1 293 aaPredicted RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 IMP3Q9NV31 184 aaKnown RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 SAMD15Q9P1V8 674 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 PISDQ9UG56 409 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 KLHL3Q9UH77 587 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 ASIC3Q9UHC3 531 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 ANAPC5Q9UJX4 755 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 CORO1CQ9ULV4 474 aaPredicted RBP5.52□□□□□ -1.53
CUX1-208ENST00000485792 KLHL20Q9Y2M5 609 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 PCDHGA6Q9Y5G7 932 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 MRFAP1Q9Y605 127 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 ZNF462Q96JM2 2506 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 TENM4Q6N022 2769 aa5.52□□□□□ -1.53
CUX1-208ENST00000485792 FREM3P0C091 2139 aa5.51□□□□□ -1.53
CUX1-208ENST00000485792 UBR5O95071 2799 aaPredicted RBP5.51□□□□□ -1.53
CUX1-208ENST00000485792 EXPH5Q8NEV8 1989 aa5.51□□□□□ -1.53
CUX1-208ENST00000485792 BAHCC1Q9P281 2608 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms