RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 RELAQ04206 551 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 ZNF460Q14592 562 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 SF1Q15637 639 aaKnown RBP15.29■□□□□ 0.04
UPF3A-208ENST00000484246 GPR19Q15760 415 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 UBAP2Q5T6F2 1119 aaKnown RBP15.29■□□□□ 0.04
UPF3A-208ENST00000484246 KIAA1614Q5VZ46 1190 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 PWWP2BQ6NUJ5 590 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 TRMT10CQ7L0Y3 403 aaKnown RBP15.29■□□□□ 0.04
UPF3A-208ENST00000484246 ADAMTSL2Q86TH1 951 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 TAX1BP1Q86VP1 789 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 NLGN4XQ8N0W4 816 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 ESX1Q8N693 406 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 EFCAB3Q8N7B9 438 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 NLGN4YQ8NFZ3 816 aaPredicted RBP15.29■□□□□ 0.04
UPF3A-208ENST00000484246 ANKRD49Q8WVL7 239 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 SLC44A1Q8WWI5 657 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.29■□□□□ 0.041e-6■■□□□ 11.4
UPF3A-208ENST00000484246 UBXN10Q96LJ8 280 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 ZNF285Q96NJ3 590 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 ULBP3Q9BZM4 244 aa15.29■□□□□ 0.04
UPF3A-208ENST00000484246 DMXL2Q8TDJ6 3036 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 OR2A25A4D2G3 310 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 CPNE3O75131 537 aaKnown RBP15.28■□□□□ 0.04
UPF3A-208ENST00000484246 KIAA0754O94854 1291 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 TIAF1O95411 115 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 ACSL3O95573 720 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 MT-ND3P03897 115 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 CCND1P24385 295 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 ITPKBP27987 946 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 PSMB5P28074 263 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 CMPK1P30085 196 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 GRIA3P42263 894 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 PRDX1Q06830 199 aaKnown RBP15.28■□□□□ 0.04
UPF3A-208ENST00000484246 ABHD18Q0P651 414 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 TEX35Q5T0J7 233 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 BROXQ5VW32 411 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 FCRL6Q6DN72 434 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 ZNF425Q6IV72 752 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 FIGLAQ6QHK4 219 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 TIPARPQ7Z3E1 657 aaKnown RBP15.28■□□□□ 0.04
UPF3A-208ENST00000484246 SYTL1Q8IYJ3 562 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 C2orf73Q8N5S3 287 aaPredicted RBP15.28■□□□□ 0.04
UPF3A-208ENST00000484246 OR1L3Q8NH93 324 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 SLC39A7Q92504 469 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 ISL2Q96A47 359 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 FBXL8Q96CD0 374 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 NAF1Q96HR8 494 aaKnown RBP15.28■□□□□ 0.04
UPF3A-208ENST00000484246 CCNL2Q96S94 520 aaPredicted RBP15.28■□□□□ 0.04
UPF3A-208ENST00000484246 SGPP1Q9BX95 441 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 FAM117AQ9C073 453 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 KLHL25Q9H0H3 589 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 PCBD2Q9H0N5 130 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 IKZF3Q9UKT9 509 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 PLCL2Q9UPR0 1127 aa15.28■□□□□ 0.04
UPF3A-208ENST00000484246 AHCTF1Q8WYP5 2266 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 ANKRD11Q6UB99 2663 aaPredicted RBP15.27■□□□□ 0.04
UPF3A-208ENST00000484246 A0A087WUV0 522 aaPredicted RBP15.27■□□□□ 0.04
UPF3A-208ENST00000484246 CCDC189A1A4V9 331 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 HMX2A2RU54 273 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 TMEM150CB9EJG8 249 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 PHGDHO43175 533 aaKnown RBP15.27■□□□□ 0.04
UPF3A-208ENST00000484246 FAM155BO75949 473 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 SYF2O95926 243 aaKnown RBP15.27■□□□□ 0.04
UPF3A-208ENST00000484246 HIST1H2AGP0C0S8 130 aaPredicted RBP15.27■□□□□ 0.04
UPF3A-208ENST00000484246 HIST1H2ADP20671 130 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 SAT1P21673 171 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 CRABP2P29373 138 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 RPA3P35244 121 aaPredicted RBP15.27■□□□□ 0.04
UPF3A-208ENST00000484246 STAT5AP42229 794 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 GCGRP47871 477 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 ITGA1P56199 1179 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 TMPRSS3P57727 454 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 ATP6V0D1P61421 351 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 TBPL1P62380 186 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 TGIF1Q15583 401 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 ZC3H12BQ5HYM0 836 aaKnown RBP15.27■□□□□ 0.04
UPF3A-208ENST00000484246 ICE2Q659A1 982 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 AGTRAPQ6RW13 159 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 ZNF517Q6ZMY9 492 aaPredicted RBP15.27■□□□□ 0.04
UPF3A-208ENST00000484246 RNF44Q7L0R7 432 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 FAM20CQ8IXL6 584 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 CACNA2D3Q8IZS8 1091 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 CNPY4Q8N129 248 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 OR56A3Q8NH54 315 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 ATL1Q8WXF7 558 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 HIST1H2AHQ96KK5 128 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 MIPEPQ99797 713 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 HIST1H2AJQ99878 128 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 H2AFJQ9BTM1 129 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 TRIM54Q9BYV2 358 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 CAB39LQ9H9S4 337 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 SLC6A20Q9NP91 592 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 CCDC177Q9NQR7 707 aaPredicted RBP15.27■□□□□ 0.04
UPF3A-208ENST00000484246 ZNF180Q9UJW8 692 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 SERTAD3Q9UJW9 196 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 OARD1Q9Y530 152 aa15.27■□□□□ 0.04
UPF3A-208ENST00000484246 ATRXP46100 2492 aa15.27■□□□□ 0.03
UPF3A-208ENST00000484246 PKD1L2Q7Z442 2459 aa15.27■□□□□ 0.03
UPF3A-208ENST00000484246 IGKV1-8A0A0C4DH67 115 aa15.26■□□□□ 0.03
UPF3A-208ENST00000484246 PABPN1LA6NDY0 278 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms