RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 SLC22A18Q96BI1 424 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 SPSB2Q99619 263 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 SELENOSQ9BQE4 189 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 KIFC1Q9BW19 673 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 TSSK1BQ9BXA7 367 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 SOX17Q9H6I2 414 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-221ENST00000483778 IL1RAPL1Q9NZN1 696 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 PLEKHB1Q9UF11 243 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-221ENST00000483778 G3BP2Q9UN86 482 aaKnown RBP17.25■□□□□ 0.35
ATG4B-221ENST00000483778 B3GNT3Q9Y2A9 372 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 HS3ST3B1Q9Y662 390 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 ITPR2Q14571 2701 aa17.25■□□□□ 0.35
ATG4B-221ENST00000483778 POLEQ07864 2286 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 KDM1AO60341 852 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 CBX6O95503 412 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 FGGP02679 453 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 RPN2P04844 631 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 RPS3P23396 243 aaKnown RBP eCLIP17.24■□□□□ 0.35
ATG4B-221ENST00000483778 GBX1Q14549 363 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 TMED2Q15363 201 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 NR6A1Q15406 480 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 HIF1AQ16665 826 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 FBXO42Q6P3S6 717 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 OTOAQ7RTW8 1153 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 CUZD1Q86UP6 607 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 HPS6Q86YV9 775 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 SKA2Q8WVK7 121 aaPredicted RBP17.24■□□□□ 0.35
ATG4B-221ENST00000483778 LPGAT1Q92604 370 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 DLG3Q92796 817 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 RAD51AP1Q96B01 352 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 TSGA10Q9BZW7 698 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 IL22Q9GZX6 179 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 ATP13A2Q9NQ11 1180 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 BFARQ9NZS9 450 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 GNPTGQ9UJJ9 305 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 CRYL1Q9Y2S2 319 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 SCN2AQ99250 2005 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 UNC79Q9P2D8 2635 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 CRYBG3Q68DQ2 2970 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 NOTCH2Q04721 2471 aa17.24■□□□□ 0.35
ATG4B-221ENST00000483778 A0A0J9YVX5 310 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 FITM1A5D6W6 292 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 MATN4O95460 622 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 CD63P08962 238 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 MMP11P24347 488 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 ARSFP54793 590 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 Q0VFX4 171 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 CYP2A13Q16696 494 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 ACSBG2Q5FVE4 666 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 ZC3H12BQ5HYM0 836 aaKnown RBP17.23■□□□□ 0.35
ATG4B-221ENST00000483778 ANKRD22Q5VYY1 191 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 LRRC8BQ6P9F7 803 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 GSTA5Q7RTV2 222 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 PARP9Q8IXQ6 854 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 PRELID2Q8N945 189 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 OR2L3Q8NG85 312 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 SSC4DQ8WTU2 575 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 ZUFSPQ96AP4 578 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 FKBP10Q96AY3 582 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 SLC30A3Q99726 388 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 ACAT2Q9BWD1 397 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 ENAMQ9NRM1 1142 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 ZC3H7BQ9UGR2 993 aaKnown RBP17.23■□□□□ 0.35
ATG4B-221ENST00000483778 CDC23Q9UJX2 597 aa17.23■□□□□ 0.35
ATG4B-221ENST00000483778 A1L4Q6 167 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 HYKKA2RU49 373 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 VSTM2BA6NLU5 285 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 TARM1B6A8C7 271 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 CEP104O60308 925 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 VPS41P49754 854 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 SNRPNP63162 240 aaKnown RBP17.22■□□□□ 0.35
ATG4B-221ENST00000483778 GRM7Q14831 915 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.22■□□□□ 0.35
ATG4B-221ENST00000483778 SUSD1Q6UWL2 747 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 Q6ZS92 163 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 CENPUQ71F23 418 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 LAPTM4BQ86VI4 370 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 CAND1Q86VP6 1230 aaKnown RBP17.22■□□□□ 0.35
ATG4B-221ENST00000483778 LRRC6Q86X45 466 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 PRSS58Q8IYP2 241 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 OTUD6BQ8N6M0 293 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 HMGCLL1Q8TB92 370 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 PANX3Q96QZ0 392 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 SLC26A1Q9H2B4 701 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 INTS7Q9NVH2 962 aaKnown RBP17.22■□□□□ 0.35
ATG4B-221ENST00000483778 SOX13Q9UN79 622 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 KLK4Q9Y5K2 254 aa17.22■□□□□ 0.35
ATG4B-221ENST00000483778 CELSR2Q9HCU4 2923 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 DOPEY1Q5JWR5 2465 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 ARHGEF33A8MVX0 844 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 FFAR3O14843 346 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 GPR42O15529 346 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 ALBP02768 609 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 EIF2S1P05198 315 aaKnown RBP17.21■□□□□ 0.35
ATG4B-221ENST00000483778 ITGA3P26006 1051 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 COL8A1P27658 744 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 GLRBP48167 497 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 AIMP2Q13155 320 aaKnown RBP17.21■□□□□ 0.35
ATG4B-221ENST00000483778 KCNJ11Q14654 390 aa17.21■□□□□ 0.35
ATG4B-221ENST00000483778 TYSND1Q2T9J0 566 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms