RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 NAA25Q14CX7 972 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 TGIF1Q15583 401 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 FAM153CQ494X1 144 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 MROH9Q5TGP6 573 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 BROXQ5VW32 411 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 KIAA1614Q5VZ46 1190 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 PWWP2BQ6NUJ5 590 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 FIGLAQ6QHK4 219 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 RAPH1Q70E73 1250 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 PPFIBP2Q8ND30 876 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.13■□□□□ 0.81
SEC13-217ENST00000482647 ACAT2Q9BWD1 397 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 DERL2Q9GZP9 239 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 FAM60AQ9NP50 221 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 WDR70Q9NW82 654 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 STOX2Q9P2F5 926 aaPredicted RBP20.13■□□□□ 0.81
SEC13-217ENST00000482647 CTNNAL1Q9UBT7 734 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 AHCTF1Q8WYP5 2266 aa20.13■□□□□ 0.81
SEC13-217ENST00000482647 CDC7O00311 574 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 RAD1O60671 282 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 CCNDBP1O95273 360 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 WISP3O95389 354 aaPredicted RBP20.12■□□□□ 0.81
SEC13-217ENST00000482647 INHBAP08476 426 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 ABHD2P08910 425 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 CCDC166P0CW27 439 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 PSMB5P28074 263 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 TNFRSF8P28908 595 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 GRIA3P42263 894 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 ATP6V0D1P61421 351 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 TLE3Q04726 772 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 THEMIS2Q5TEJ8 643 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 AGTRAPQ6RW13 159 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 SBSNQ6UWP8 590 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 LRRC56Q8IYG6 542 aaPredicted RBP20.12■□□□□ 0.81
SEC13-217ENST00000482647 NLGN4XQ8N0W4 816 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 DNAJC22Q8N4W6 341 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 NLGN4YQ8NFZ3 816 aaPredicted RBP20.12■□□□□ 0.81
SEC13-217ENST00000482647 SLC44A1Q8WWI5 657 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 ATL1Q8WXF7 558 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 NKD1Q969G9 470 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 PCBD2Q9H0N5 130 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 KLK4Q9Y5K2 254 aa20.12■□□□□ 0.81
SEC13-217ENST00000482647 SCRG1O75711 98 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 KIAA0754O94854 1291 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 MT-ND3P03897 115 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 ZNF28P17035 718 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 ITPKBP27987 946 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 DEKP35659 375 aaKnown RBP20.11■□□□□ 0.81
SEC13-217ENST00000482647 MSH2P43246 934 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 ITGA1P56199 1179 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 ABATP80404 500 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 PRDX1Q06830 199 aaKnown RBP20.11■□□□□ 0.81
SEC13-217ENST00000482647 MAP7Q14244 749 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 ZC3H12BQ5HYM0 836 aaKnown RBP20.11■□□□□ 0.81
SEC13-217ENST00000482647 FCRL6Q6DN72 434 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 C6orf15Q6UXA7 325 aaPredicted RBP20.11■□□□□ 0.81
SEC13-217ENST00000482647 TAOK1Q7L7X3 1001 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 ADAMTSL2Q86TH1 951 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 TMEM126BQ8IUX1 230 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 GPR135Q8IZ08 494 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 CACNA2D3Q8IZS8 1091 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 ESX1Q8N693 406 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 OR1L3Q8NH93 324 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 UHMK1Q8TAS1 419 aaKnown RBP20.11■□□□□ 0.81
SEC13-217ENST00000482647 HNRNPLLQ8WVV9 542 aaKnown RBP20.11■□□□□ 0.81
SEC13-217ENST00000482647 UBXN10Q96LJ8 280 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 TXLNGYQ9BZA5 131 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 MRPS30Q9NP92 439 aaKnown RBP20.11■□□□□ 0.81
SEC13-217ENST00000482647 CCDC177Q9NQR7 707 aaPredicted RBP20.11■□□□□ 0.81
SEC13-217ENST00000482647 ABCF3Q9NUQ8 709 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 UTP6Q9NYH9 597 aaKnown RBP20.11■□□□□ 0.81
SEC13-217ENST00000482647 TAC3Q9UHF0 121 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 IKZF3Q9UKT9 509 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 PLCL2Q9UPR0 1127 aa20.11■□□□□ 0.81
SEC13-217ENST00000482647 ZFHX4Q86UP3 3567 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 NPEPPSL1A6NEC2 478 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 POC1B-GALNT4F8VUJ3 575 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 RIPK2O43353 540 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 TIAF1O95411 115 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 DLGAP3O95886 979 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 CCNYL3P0C7X3 344 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 CCND1P24385 295 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 SLC26A3P40879 764 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 SERPINB9P50453 376 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 UCNP55089 124 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 BMPR2Q13873 1038 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 PPP1R3AQ16821 1122 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 MANEAQ5SRI9 462 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 ICE2Q659A1 982 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 MBOAT1Q6ZNC8 495 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 FRA10AC1Q70Z53 315 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 TIPARPQ7Z3E1 657 aaKnown RBP20.1■□□□□ 0.81
SEC13-217ENST00000482647 CCDC91Q7Z6B0 441 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 CMC1Q7Z7K0 106 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 TBC1D1Q86TI0 1168 aaPredicted RBP20.1■□□□□ 0.81
SEC13-217ENST00000482647 MCATQ8IVS2 390 aaKnown RBP20.1■□□□□ 0.81
SEC13-217ENST00000482647 GSPT2Q8IYD1 628 aaKnown RBP20.1■□□□□ 0.81
SEC13-217ENST00000482647 SPATA6LQ8N4H0 392 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 IL22RA1Q8N6P7 574 aa20.1■□□□□ 0.81
SEC13-217ENST00000482647 FBXL8Q96CD0 374 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms