RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 AP3B1O00203 1094 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 FTCDO95954 541 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 IFNB1P01574 187 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 RPS3P23396 243 aaKnown RBP eCLIP12.43□□□□□ -0.42
ABCF3-212ENST00000478288 DCTP40126 519 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 GRIA1P42261 906 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 GRIA3P42263 894 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 CSE1LP55060 971 aaKnown RBP12.43□□□□□ -0.42
ABCF3-212ENST00000478288 TUBB8Q3ZCM7 444 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 PRMT9Q6P2P2 845 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 TMEM139Q8IV31 216 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 TAB3Q8N5C8 712 aaPredicted RBP12.43□□□□□ -0.42
ABCF3-212ENST00000478288 OR11G2Q8NGC1 345 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 GSDMBQ8TAX9 411 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 IL17FQ96PD4 163 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 EPS8L2Q9H6S3 715 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 RAB6BQ9NRW1 208 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 TREX1Q9NSU2 369 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 PAK5Q9P286 719 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 CTSFQ9UBX1 484 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 NTNG1Q9Y2I2 539 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 KLHL20Q9Y2M5 609 aa12.43□□□□□ -0.42
ABCF3-212ENST00000478288 PKDREJQ9NTG1 2253 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 IGLV3-12A0A075B6K2 115 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 A0A1W2PQ72 361 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 IQCF5A8MTL0 148 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 E2F3O00716 465 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 CD3EAPO15446 510 aaKnown RBP12.42□□□□□ -0.42
ABCF3-212ENST00000478288 CTSVO60911 334 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 PHF2O75151 1096 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 C1orf105O95561 183 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 APRTP07741 180 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 EDN3P14138 238 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 ATP5DP30049 168 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 GLRBP48167 497 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 EMP3P54852 163 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 ZNF169Q14929 603 aaPredicted RBP12.42□□□□□ -0.42
ABCF3-212ENST00000478288 TLR1Q15399 786 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 RBBP7Q16576 425 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 PCID2Q5JVF3 399 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 SEL1L2Q5TEA6 688 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 ARMC3Q5W041 872 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 PTRHD1Q6GMV3 140 aaKnown RBP12.42□□□□□ -0.42
ABCF3-212ENST00000478288 C4orf22Q6V702 233 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 RNF44Q7L0R7 432 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 OTOAQ7RTW8 1153 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 KCNMB4Q86W47 210 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 TICAM1Q8IUC6 712 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 TMEM151BQ8IW70 566 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 CCDC89Q8N998 374 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 OR2L3Q8NG85 312 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 CFAP61Q8NHU2 1237 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 MAGEC3Q8TD91 643 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 LMF1Q96S06 567 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 TRIM56Q9BRZ2 755 aaKnown RBP12.42□□□□□ -0.42
ABCF3-212ENST00000478288 IL22Q9GZX6 179 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 SPATA7Q9P0W8 599 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 MARCH4Q9P2E8 410 aaPredicted RBP12.42□□□□□ -0.42
ABCF3-212ENST00000478288 ZNF148Q9UQR1 794 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 CAPN6Q9Y6Q1 641 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 SCN2AQ99250 2005 aa12.42□□□□□ -0.42
ABCF3-212ENST00000478288 TACC2O95359 2948 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 HYKKA2RU49 373 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 MASP2O00187 686 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 PCDH17O14917 1159 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 HPP00738 406 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 ERGP11308 486 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 FDXRP22570 491 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 MCM3P25205 808 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 ADARP55265 1226 aaKnown RBP12.41□□□□□ -0.42
ABCF3-212ENST00000478288 PER3P56645 1201 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 MFAP5Q13361 173 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 GBX1Q14549 363 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 HIF1AQ16665 826 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 RNF187Q5TA31 235 aaPredicted RBP12.41□□□□□ -0.42
ABCF3-212ENST00000478288 CROCCQ5TZA2 2017 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 RPUSD3Q6P087 351 aaKnown RBP12.41□□□□□ -0.42
ABCF3-212ENST00000478288 ISLR2Q6UXK2 745 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 OTOGQ6ZRI0 2925 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 TAX1BP1Q86VP1 789 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 SLC13A5Q86YT5 568 aaPredicted RBP12.41□□□□□ -0.42
ABCF3-212ENST00000478288 SLC34A3Q8N130 599 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 KRT222Q8N1A0 295 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 DNAJB14Q8TBM8 379 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 FAR1Q8WVX9 515 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.41□□□□□ -0.42
ABCF3-212ENST00000478288 MVB12AQ96EY5 273 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 FOPNLQ96NB1 174 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 SLX1AQ9BQ83 275 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 CRB3Q9BUF7 120 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 SOX17Q9H6I2 414 aaPredicted RBP12.41□□□□□ -0.42
ABCF3-212ENST00000478288 CHRAC1Q9NRG0 131 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 ZNF282Q9UDV7 671 aaPredicted RBP12.41□□□□□ -0.42
ABCF3-212ENST00000478288 CSAG2Q9Y5P2 127 aa12.41□□□□□ -0.42
ABCF3-212ENST00000478288 A0A1W2PPV9 198 aa12.4□□□□□ -0.42
ABCF3-212ENST00000478288 OR2A25A4D2G3 310 aa12.4□□□□□ -0.42
ABCF3-212ENST00000478288 ENO4A6NNW6 628 aa12.4□□□□□ -0.42
ABCF3-212ENST00000478288 H3BMM5 538 aa12.4□□□□□ -0.42
ABCF3-212ENST00000478288 USP1O94782 785 aa12.4□□□□□ -0.42
ABCF3-212ENST00000478288 MATN4O95460 622 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms