RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 RLN3Q8WXF3 142 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 MTBPQ96DY7 904 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 RNF125Q96EQ8 232 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 ZNF578Q96N58 590 aaPredicted RBP4.53□□□□□ -1.68
VPS50-214ENST00000477935 SEMA3CQ99985 751 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 TRIM4Q9C037 500 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 MAGEE1Q9HCI5 957 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 PLSCR4Q9NRQ2 329 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 STARD5Q9NSY2 213 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 BCCIPQ9P287 314 aaKnown RBP eCLIP4.53□□□□□ -1.68
VPS50-214ENST00000477935 PDP2Q9P2J9 529 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 MALT1Q9UDY8 824 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 SLCO3A1Q9UIG8 710 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 SLC13A4Q9UKG4 626 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 FAM96BQ9Y3D0 163 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 HES2Q9Y543 173 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 CENPEQ02224 2701 aa4.53□□□□□ -1.68
VPS50-214ENST00000477935 COL4A2P08572 1712 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 ATXN2Q99700 1313 aaKnown RBP4.52□□□□□ -1.69
VPS50-214ENST00000477935 ABCA2Q9BZC7 2435 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 ESYT2A0FGR8 921 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 CASTOR2A6NHX0 329 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 FAM86B1E9PN63 330 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 IFNL4K9M1U5 179 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 NDUFS7O75251 213 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 SEC24AO95486 1093 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 TFP02787 698 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 MMP2P08253 660 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 SNRNP70P08621 437 aaKnown RBP4.52□□□□□ -1.69
VPS50-214ENST00000477935 FAM86B2P0C5J1 330 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 MATKP42679 507 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 GRIK2Q13002 908 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 TRDNQ13061 729 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 MXD4Q14582 209 aaPredicted RBP4.52□□□□□ -1.69
VPS50-214ENST00000477935 CALCRLQ16602 461 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 UBE2SQ16763 222 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 MMEL1Q495T6 779 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 SLC27A1Q6PCB7 646 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 DNAJB7Q7Z6W7 309 aaPredicted RBP4.52□□□□□ -1.69
VPS50-214ENST00000477935 NR2C2APQ86WQ0 139 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 TRIML1Q8N9V2 468 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 BEST2Q8NFU1 509 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 CTCFLQ8NI51 663 aaPredicted RBP4.52□□□□□ -1.69
VPS50-214ENST00000477935 CREB3L4Q8TEY5 395 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 TCP11Q8WWU5 503 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 PIBF1Q8WXW3 757 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 ST8SIA4Q92187 359 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 ZNF570Q96NI8 536 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 OR1F2PQ96R84 312 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 H2AFJQ9BTM1 129 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 MINDY3Q9H8M7 445 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 ECT2Q9H8V3 914 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 KIF9Q9HAQ2 790 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 BPIFA1Q9NP55 256 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 NOX4Q9NPH5 578 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 HPS4Q9NQG7 708 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 KCND2Q9NZV8 630 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 MPP6Q9NZW5 540 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 DDX19BQ9UMR2 479 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 SNX9Q9Y5X1 595 aa4.52□□□□□ -1.69
VPS50-214ENST00000477935 TLN1Q9Y490 2541 aaKnown RBP4.51□□□□□ -1.69
VPS50-214ENST00000477935 PCNX1Q96RV3 2341 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 PHLPP2Q6ZVD8 1323 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 PTPRBP23467 1997 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 IGLV3-22A0A075B6J6 115 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 A0A1B0GUA9 196 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 K7ENP7 123 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 K7EQS6 105 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 LDLRAD4O15165 306 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 TSPAN1O60635 241 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 DKC1O60832 514 aaKnown RBP eCLIP4.51□□□□□ -1.69
VPS50-214ENST00000477935 KDM4BO94953 1096 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 IRF1P10914 325 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 ABCD3P28288 659 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 CDC25CP30307 473 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 STX2P32856 288 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 PAFAH1B1P43034 410 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 ARPP19P56211 112 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 PTENP60484 403 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 ERVPABLB-1P60509 514 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 ECT2LQ008S8 904 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 LAMTOR4Q0VGL1 99 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 BFSP1Q12934 665 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 ILKQ13418 452 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 TFDP1Q14186 410 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 UPP1Q16831 310 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 HLA-BQ31612 363 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 AMZ1Q400G9 498 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 PAPPA-AS1Q5QFB9 102 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 FAM69AQ5T7M9 428 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 INO80CQ6PI98 192 aaPredicted RBP4.51□□□□□ -1.69
VPS50-214ENST00000477935 LCTLQ6UWM7 567 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 HEATR4Q86WZ0 1026 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 ERICH1Q86X53 443 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 CMTM8Q8IZV2 173 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 FRMD1Q8N878 549 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 RNF149Q8NC42 400 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 APPL2Q8NEU8 664 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 DNASE2BQ8WZ79 361 aa4.51□□□□□ -1.69
VPS50-214ENST00000477935 PSMG2Q969U7 264 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms