RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 CRYABP02511 175 aaKnown RBP6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 HEXBP07686 556 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 CELA2AP08217 269 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 ZGLP1P0C6A0 271 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 PRR35P0CG20 571 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 MYBL2P10244 700 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 RBP3P10745 1247 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 CD9P21926 228 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 PSMB5P28074 263 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 ACADLP28330 430 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 TNFSF10P50591 281 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 SMSP52788 366 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 NAP1L1P55209 391 aaKnown RBP6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 ZNF33BQ06732 778 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 DSG2Q14126 1118 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 TRIM14Q14142 442 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 TMED2Q15363 201 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 INAQ16352 499 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 ZNF630Q2M218 657 aaPredicted RBP6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 FAM214AQ32MH5 1076 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 ZNF658BQ4V348 819 aaPredicted RBP6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 CCDC38Q502W7 563 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 WASHC2DQ5SRD0 308 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 ABHD17BQ5VST6 288 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 YOD1Q5VVQ6 348 aaPredicted RBP6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 HIBCHQ6NVY1 386 aaPredicted RBP6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 RPUSD3Q6P087 351 aaKnown RBP6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 TTC23LQ6PF05 361 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 FIGLAQ6QHK4 219 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 RPTNQ6XPR3 784 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 NEK10Q6ZWH5 1172 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 NDUFAF7Q7L592 441 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 CEP97Q8IW35 865 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 DCUN1D3Q8IWE4 304 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 KATNAL2Q8IYT4 538 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 RAB42Q8N4Z0 105 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 LINC01555Q8NAE3 123 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 CDKN2AIPNLQ96HQ2 116 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 SPATA13Q96N96 652 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 PPP1R2P1Q96PQ5 205 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 LMF1Q96S06 567 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 TTC1Q99614 292 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 MIPEPQ99797 713 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 CHRNA10Q9GZZ6 450 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 TSPAN10Q9H1Z9 355 aaPredicted RBP6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 SLC26A1Q9H2B4 701 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 ABHD10Q9NUJ1 306 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 ABCF3Q9NUQ8 709 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 IL1RAPL1Q9NZN1 696 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 TRPC4Q9UBN4 977 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 TINAGQ9UJW2 476 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 BOLA1Q9Y3E2 137 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 ALG6Q9Y672 507 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 GTF3C1Q12789 2109 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 SETD2Q9BYW2 2564 aaPredicted RBP6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 CELSR1Q9NYQ6 3014 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 SLC5A10A0PJK1 596 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 CCDC162PA2VCL2 907 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 A8MUI8 341 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 BHMG1C9JSJ3 638 aaPredicted RBP6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 RASGRF2O14827 1237 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 CBFA2T2O43439 604 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 OR1I1O60431 355 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 SLC19A2O60779 497 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 WDPCPO95876 746 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 GAS8O95995 478 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 APOA4P06727 396 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 ANXA5P08758 320 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 COX6A1P12074 109 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 MST1P26927 711 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 SSTR2P30874 369 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 CETN2P41208 172 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 CA7P43166 264 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 BDKRB1P46663 353 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 EMP2P54851 167 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 PLOD1Q02809 727 aaPredicted RBP6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 ITIH4Q14624 930 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 TAZQ16635 292 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 LONRF1Q17RB8 773 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 ASTE1Q2TB18 679 aaPredicted RBP6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 DNAJC21Q5F1R6 531 aaKnown RBP6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 FRMPD2BQ6IN97 320 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 DENND5AQ6IQ26 1287 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 BBS12Q6ZW61 710 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 CDH24Q86UP0 819 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 LAPTM4BQ86VI4 370 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 VRK3Q8IV63 474 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 OTUD6BQ8N6M0 293 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 DNAAF3Q8N9W5 541 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 OR6P1Q8NGX9 317 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 OR2L8Q8NGY9 312 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 STYXQ8WUJ0 223 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 KRT35Q92764 455 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 MMABQ96EY8 250 aaPredicted RBP6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 DNAJC7Q99615 494 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 ACAT2Q9BWD1 397 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 TRIM8Q9BZR9 551 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 LRRC40Q9H9A6 602 aa6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 LUC7LQ9NQ29 371 aaKnown RBP6.37□□□□□ -1.39
RTFDC1-206ENST00000477485 KLHL1Q9NR64 748 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms