RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ZNF843Q8N446 348 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 NKAPQ8N5F7 415 aaKnown RBP15.16■□□□□ 0.02
CPSF3-203ENST00000475482 LILRA3Q8N6C8 439 aaPredicted RBP15.16■□□□□ 0.02
CPSF3-203ENST00000475482 SPDYE1Q8NFV5 336 aaPredicted RBP15.16■□□□□ 0.02
CPSF3-203ENST00000475482 HM13Q8TCT9 377 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 ZDHHC12Q96GR4 267 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 BIRC8Q96P09 236 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 OLFM1Q99784 485 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 SLC12A9Q9BXP2 914 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 WWP1Q9H0M0 922 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 NMRAL1Q9HBL8 299 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 TRMT6Q9UJA5 497 aaKnown RBP15.16■□□□□ 0.02
CPSF3-203ENST00000475482 SPTA1P02549 2419 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 POLR1CO15160 346 aaPredicted RBP15.15■□□□□ 0.02
CPSF3-203ENST00000475482 PLIN3O60664 434 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 RAD1O60671 282 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 AP2A2O94973 939 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 RBP1P09455 135 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 DHRS4L1P0CG22 281 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 CCDC166P0CW27 439 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 ETV4P43268 484 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 SERPINB4P48594 390 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 CDKN2DP55273 166 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 WDR4P57081 412 aaKnown RBP15.15■□□□□ 0.02
CPSF3-203ENST00000475482 C19orf57Q0VDD7 668 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 MAP7Q14244 749 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 ACAP2Q15057 778 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 PDK4Q16654 411 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 CDHR3Q6ZTQ4 885 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 TIPARPQ7Z3E1 657 aaKnown RBP15.15■□□□□ 0.02
CPSF3-203ENST00000475482 CACNA2D3Q8IZS8 1091 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 ARMC2Q8NEN0 867 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 ACVR1CQ8NER5 493 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 RAB3IL1Q8TBN0 382 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 LRRC8CQ8TDW0 803 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 JPH3Q8WXH2 748 aaPredicted RBP15.15■□□□□ 0.02
CPSF3-203ENST00000475482 SLC41A2Q96JW4 573 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 SCYL1Q96KG9 808 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 RMDN2Q96LZ7 410 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 CTRCQ99895 268 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 CCM2Q9BSQ5 444 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 SEMA4CQ9C0C4 833 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 OR52A5Q9H2C5 316 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 KIR3DX1Q9H7L2 352 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 MLXIPLQ9NP71 852 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 KLHL42Q9P2K6 505 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 RUVBL2Q9Y230 463 aaKnown RBP15.15■□□□□ 0.02
CPSF3-203ENST00000475482 SEC16AO15027 2179 aa15.15■□□□□ 0.02
CPSF3-203ENST00000475482 SPTBP11277 2137 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 GCN1Q92616 2671 aaKnown RBP15.14■□□□□ 0.01
CPSF3-203ENST00000475482 GMNCA6NCL1 334 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 KPNA5O15131 536 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 OR1I1O60431 355 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 GSTM1P09488 218 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 ZNF37AP17032 561 aaPredicted RBP15.14■□□□□ 0.01
CPSF3-203ENST00000475482 NELFEP18615 380 aaKnown RBP15.14■□□□□ 0.01
CPSF3-203ENST00000475482 MAP4P27816 1152 aaKnown RBP15.14■□□□□ 0.01
CPSF3-203ENST00000475482 PBLDP30039 288 aaPredicted RBP15.14■□□□□ 0.01
CPSF3-203ENST00000475482 RGS4P49798 205 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 PRKAA2P54646 552 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 ATP6V0D1P61421 351 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 PPP1CAP62136 330 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 SH3BP2P78314 561 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 GSTM4Q03013 218 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 ASPHQ12797 758 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 IL11RAQ14626 422 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 TTLL9Q3SXZ7 439 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 CACHD1Q5VU97 1274 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 ATG16L1Q676U5 607 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 TTC19Q6DKK2 380 aaPredicted RBP15.14■□□□□ 0.01
CPSF3-203ENST00000475482 KLHL35Q6PF15 583 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 NUDCD3Q8IVD9 361 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 CFAP206Q8IYR0 622 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 NLGN4XQ8N0W4 816 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 NLGN4YQ8NFZ3 816 aaPredicted RBP15.14■□□□□ 0.01
CPSF3-203ENST00000475482 CHMP6Q96FZ7 201 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 UBXN10Q96LJ8 280 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 C12orf66Q96MD2 445 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 CD180Q99467 661 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 MRPL57Q9BQC6 102 aaKnown RBP15.14■□□□□ 0.01
CPSF3-203ENST00000475482 NSRP1Q9H0G5 558 aaKnown RBP15.14■□□□□ 0.01
CPSF3-203ENST00000475482 EPN3Q9H201 632 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 COG4Q9H9E3 785 aa15.14■□□□□ 0.01
CPSF3-203ENST00000475482 IMP3Q9NV31 184 aaKnown RBP15.14■□□□□ 0.01
CPSF3-203ENST00000475482 CFAP20Q9Y6A4 193 aaKnown RBP15.14■□□□□ 0.01
CPSF3-203ENST00000475482 IGHV5-51A0A0C4DH38 117 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 OR5K3A6NET4 321 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 H2AFYO75367 372 aaKnown RBP15.13■□□□□ 0.01
CPSF3-203ENST00000475482 STK17BO94768 372 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 FTH1P02794 183 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 PROCP04070 461 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 SLC35G4P0C7Q5 338 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 FGF5P12034 268 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 LIFP15018 202 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 TAC1P20366 129 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 SEPHS1P49903 392 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 IL2P60568 153 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 IRF9Q00978 393 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 ABHD18Q0P651 414 aa15.13■□□□□ 0.01
CPSF3-203ENST00000475482 RPA4Q13156 261 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms