RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 LIFP15018 202 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 CA4P22748 312 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 JAK1P23458 1154 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 EEF1B2P24534 225 aaKnown RBP3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 GP5P40197 560 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 UBASH3AP57075 661 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 IRX6P78412 446 aaPredicted RBP3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 PPARDQ03181 441 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 CUL3Q13618 768 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 ITGA7Q13683 1181 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 ITPRIPL2Q3MIP1 535 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 UGT3A2Q3SY77 523 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 DCAF10Q5QP82 559 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 CAVIN1Q6NZI2 390 aaKnown RBP3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 SLC27A1Q6PCB7 646 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 GALNTL5Q7Z4T8 443 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 ISCA2Q86U28 154 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 MMD2Q8IY49 270 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 DNAJC22Q8N4W6 341 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 STAMBPL1Q96FJ0 436 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 RMDN2Q96LZ7 410 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 RAB3IPQ96QF0 476 aaPredicted RBP3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 MGME1Q9BQP7 344 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 RHNO1Q9BSD3 238 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 Q9H8V8 135 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 ZDHHC2Q9UIJ5 367 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 CACNA1FO60840 1977 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 DHX57Q6P158 1386 aaKnown RBP3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 ABCC8Q09428 1581 aa3.21□□□□□ -1.9
TMEM50B-208ENST00000474272 KIF27Q86VH2 1401 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 ERICH3Q5RHP9 1530 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 KIAA1210Q9ULL0 1709 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 LOC101059948A0A1B0GTJ6 334 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 DUXAA6NLW8 204 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 CCER2I3L3R5 266 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 NR5A2O00482 541 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 CIDEAO60543 219 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 TBCAO75347 108 aaKnown RBP3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 ZNF821O75541 412 aaPredicted RBP3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 INHBAP08476 426 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 CD48P09326 243 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 SCG2P13521 617 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 HOXC8P31273 242 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 MNDAP41218 407 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 CLK1P49759 484 aaKnown RBP3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 CSRP3P50461 194 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 IRX1P78414 480 aaPredicted RBP3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 SCARB2Q14108 478 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 LBHQ53QV2 105 aaPredicted RBP3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 SFMBT2Q5VUG0 894 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 C11orf63Q6NUN7 778 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 RBMS3Q6XE24 437 aaKnown RBP3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 ADCK2Q7Z695 626 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 DNAJB7Q7Z6W7 309 aaPredicted RBP3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 GLRX5Q86SX6 157 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 NUDT13Q86X67 352 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 FAM219AQ8IW50 185 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 STPG4Q8N801 248 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 ZNF611Q8N823 705 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 MAPKAPK5-AS1Q8N8E1 139 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 ZNF383Q8NA42 475 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 THAP8Q8NA92 274 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 VANGL1Q8TAA9 524 aaPredicted RBP3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 PIGBQ92521 554 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 TM9SF4Q92544 642 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 LRR1Q96L50 414 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 FAM20AQ96MK3 541 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 SPATA33Q96N06 139 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 FNBP1Q96RU3 617 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 RAD9AQ99638 391 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 KATNB1Q9BVA0 655 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 BICC1Q9H694 974 aaKnown RBP3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 CDH20Q9HBT6 801 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 DNAJC4Q9NNZ3 241 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 SLC52A3Q9NQ40 469 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 SDR39U1Q9NRG7 319 aaPredicted RBP3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 SPHK1Q9NYA1 384 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 PAK5Q9P286 719 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 CACNG4Q9UBN1 327 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 POLLQ9UGP5 575 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 WDR83OSQ9Y284 106 aa3.2□□□□□ -1.9
TMEM50B-208ENST00000474272 A0A087WV48 116 aa3.19□□□□□ -1.9
TMEM50B-208ENST00000474272 IGLV9-49A0A0B4J1Y8 123 aa3.19□□□□□ -1.9
TMEM50B-208ENST00000474272 A0A1W2PN81 502 aa3.19□□□□□ -1.9
TMEM50B-208ENST00000474272 ANXA2P2A6NMY6 339 aa3.19□□□□□ -1.9
TMEM50B-208ENST00000474272 PCDH7O60245 1069 aa3.19□□□□□ -1.9
TMEM50B-208ENST00000474272 PIGNO95427 931 aa3.19□□□□□ -1.9
TMEM50B-208ENST00000474272 FRMD6-AS1P0C7T7 363 aa3.19□□□□□ -1.9
TMEM50B-208ENST00000474272 TCF4P15884 667 aa3.19□□□□□ -1.9
TMEM50B-208ENST00000474272 EPCAMP16422 314 aa3.19□□□□□ -1.9
TMEM50B-208ENST00000474272 EFNA1P20827 205 aaPredicted RBP3.19□□□□□ -1.9
TMEM50B-208ENST00000474272 CD27P26842 260 aa3.19□□□□□ -1.9
TMEM50B-208ENST00000474272 CDC25CP30307 473 aa3.19□□□□□ -1.9
TMEM50B-208ENST00000474272 CHRNA7P36544 502 aa3.19□□□□□ -1.9
TMEM50B-208ENST00000474272 PRKCIP41743 596 aa3.19□□□□□ -1.9
TMEM50B-208ENST00000474272 CLDN15P56746 228 aa3.19□□□□□ -1.9
TMEM50B-208ENST00000474272 RBP5P82980 135 aa3.19□□□□□ -1.9
TMEM50B-208ENST00000474272 VEZF1Q14119 521 aa3.19□□□□□ -1.9
TMEM50B-208ENST00000474272 NPTX1Q15818 432 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms