RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 ABATP80404 500 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 MAP7Q14244 749 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 ZNF460Q14592 562 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 EFTUD2Q15029 972 aaKnown RBP eCLIP13.24□□□□□ -0.293e-7■■■■□ 19.6
USF1-205ENST00000473969 TGIF1Q15583 401 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 KIAA1614Q5VZ46 1190 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 PWWP2BQ6NUJ5 590 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 C19orf48Q6RUI8 117 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 CCDC81Q6ZN84 652 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 CDHR3Q6ZTQ4 885 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 TBC1D1Q86TI0 1168 aaPredicted RBP13.24□□□□□ -0.29
USF1-205ENST00000473969 DTX1Q86Y01 620 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 SPNS2Q8IVW8 549 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 CEP97Q8IW35 865 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 FAM20CQ8IXL6 584 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 EIF1ADQ8N9N8 165 aaKnown RBP13.24□□□□□ -0.29
USF1-205ENST00000473969 PPFIBP2Q8ND30 876 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 OR2L3Q8NG85 312 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 ALKBH8Q96BT7 664 aaKnown RBP13.24□□□□□ -0.29
USF1-205ENST00000473969 CLIP3Q96DZ5 547 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 MED8Q96G25 268 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 MCMBPQ9BTE3 642 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 CHRNA10Q9GZZ6 450 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 ACSS3Q9H6R3 686 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 TAC3Q9UHF0 121 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 TLK1Q9UKI8 766 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 PILRAQ9UKJ1 303 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 NOVA2Q9UNW9 492 aaKnown RBP13.24□□□□□ -0.29
USF1-205ENST00000473969 KLHL20Q9Y2M5 609 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 URB1O60287 2271 aaKnown RBP13.23□□□□□ -0.29
USF1-205ENST00000473969 E7ENX8 843 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 POC1B-GALNT4F8VUJ3 575 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 PHGDHO43175 533 aaKnown RBP13.23□□□□□ -0.29
USF1-205ENST00000473969 PRICKLE3O43900 615 aaPredicted RBP13.23□□□□□ -0.29
USF1-205ENST00000473969 CPNE3O75131 537 aaKnown RBP13.23□□□□□ -0.29
USF1-205ENST00000473969 OR2B3O76000 313 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 SLU7O95391 586 aaKnown RBP13.23□□□□□ -0.29
USF1-205ENST00000473969 GUCA1CO95843 209 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 C1QAP02745 245 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 NTRK1P04629 796 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 KLK3P07288 261 aaPredicted RBP13.23□□□□□ -0.29
USF1-205ENST00000473969 ANXA5P08758 320 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 HBQ1P09105 142 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 CCDC166P0CW27 439 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 PSMB5P28074 263 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 IMPA1P29218 277 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 GRIA3P42263 894 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 MSH2P43246 934 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 SERPINB9P50453 376 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 ATP6V0D1P61421 351 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 TAP2Q03519 686 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 TLE3Q04726 772 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 ABHD18Q0P651 414 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 LGSNQ5TDP6 509 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 MROH9Q5TGP6 573 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 CAPN13Q6MZZ7 669 aaPredicted RBP13.23□□□□□ -0.29
USF1-205ENST00000473969 AGTRAPQ6RW13 159 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 TMEM207Q6UWW9 146 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 ADCK2Q7Z695 626 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 CCDC91Q7Z6B0 441 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 ADAMTSL2Q86TH1 951 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 GALNT6Q8NCL4 622 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 LRRN4CLQ8ND94 238 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 OR2A1Q8NGT9 310 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 UHMK1Q8TAS1 419 aaKnown RBP13.23□□□□□ -0.29
USF1-205ENST00000473969 NKD1Q969G9 470 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 EGFL8Q99944 293 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 CCDC77Q9BR77 488 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 DERL2Q9GZP9 239 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 TWSG1Q9GZX9 223 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 ATG10Q9H0Y0 220 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 STOX2Q9P2F5 926 aaPredicted RBP13.23□□□□□ -0.29
USF1-205ENST00000473969 ANKMY1Q9P2S6 941 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 PADI1Q9ULC6 663 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 SNX7Q9UNH6 387 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 AP1M2Q9Y6Q5 423 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 ACACAQ13085 2346 aa13.23□□□□□ -0.29
USF1-205ENST00000473969 APC2O95996 2303 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 A0A1W2PPV9 198 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 NPEPPSL1A6NEC2 478 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 CDC7O00311 574 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 KRT38O76015 456 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 ZNF28P17035 718 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 HRH2P25021 359 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 PRDX1Q06830 199 aaKnown RBP13.22□□□□□ -0.29
USF1-205ENST00000473969 NAE1Q13564 534 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 CSHL1Q14406 222 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 ZIC1Q15915 447 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 PHKG1Q16816 387 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 DEFB110Q30KQ9 67 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 TAF1BQ53T94 588 aaPredicted RBP13.22□□□□□ -0.29
USF1-205ENST00000473969 PRAMEF13Q5VWM6 474 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 ICE2Q659A1 982 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 TLDC1Q6P9B6 456 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 MCATQ8IVS2 390 aaKnown RBP13.22□□□□□ -0.29
USF1-205ENST00000473969 DNAJC22Q8N4W6 341 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 OR1L3Q8NH93 324 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 ANKRD49Q8WVL7 239 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.22□□□□□ -0.29
USF1-205ENST00000473969 DLG3Q92796 817 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms