RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 THEMIS2Q5TEJ8 643 aa18.55■□□□□ 0.56
PSPC1-203ENST00000471658 NKAIN2Q5VXU1 208 aa18.55■□□□□ 0.56
PSPC1-203ENST00000471658 FRMD7Q6ZUT3 714 aa18.55■□□□□ 0.56
PSPC1-203ENST00000471658 LRRC70Q7Z2Q7 622 aa18.55■□□□□ 0.56
PSPC1-203ENST00000471658 LRRC8CQ8TDW0 803 aa18.55■□□□□ 0.56
PSPC1-203ENST00000471658 RHBDD1Q8TEB9 315 aa18.55■□□□□ 0.56
PSPC1-203ENST00000471658 CCDC74AQ96AQ1 378 aa18.55■□□□□ 0.56
PSPC1-203ENST00000471658 NOL11Q9H8H0 719 aaKnown RBP18.55■□□□□ 0.56
PSPC1-203ENST00000471658 DNAJC11Q9NVH1 559 aa18.55■□□□□ 0.56
PSPC1-203ENST00000471658 OR6C2Q9NZP2 312 aa18.55■□□□□ 0.56
PSPC1-203ENST00000471658 TAC3Q9UHF0 121 aa18.55■□□□□ 0.56
PSPC1-203ENST00000471658 ANGPTL3Q9Y5C1 460 aa18.55■□□□□ 0.56
PSPC1-203ENST00000471658 ZNF839A8K0R7 811 aa18.54■□□□□ 0.56
PSPC1-203ENST00000471658 ISM1B1AKI9 464 aa18.54■□□□□ 0.56
PSPC1-203ENST00000471658 OR7A17O14581 309 aa18.54■□□□□ 0.56
PSPC1-203ENST00000471658 PRAMEF4O60810 478 aa18.54■□□□□ 0.56
PSPC1-203ENST00000471658 UBXN7O94888 489 aa18.54■□□□□ 0.56
PSPC1-203ENST00000471658 PRDX3P30048 256 aaKnown RBP18.54■□□□□ 0.56
PSPC1-203ENST00000471658 GRK6P43250 576 aa18.54■□□□□ 0.56
PSPC1-203ENST00000471658 SLC1A6P48664 564 aa18.54■□□□□ 0.56
PSPC1-203ENST00000471658 PPP1CAP62136 330 aa18.54■□□□□ 0.56
PSPC1-203ENST00000471658 RCN2Q14257 317 aa18.54■□□□□ 0.56
PSPC1-203ENST00000471658 ARL13AQ5H913 290 aaPredicted RBP18.54■□□□□ 0.56
PSPC1-203ENST00000471658 PRAMEF9Q5VWM5 478 aa18.54■□□□□ 0.56
PSPC1-203ENST00000471658 DCBLD1Q8N8Z6 715 aa18.54■□□□□ 0.56
PSPC1-203ENST00000471658 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.54■□□□□ 0.56
PSPC1-203ENST00000471658 DRC3Q9H069 523 aa18.54■□□□□ 0.56
PSPC1-203ENST00000471658 IPPKQ9H8X2 491 aa18.54■□□□□ 0.56
PSPC1-203ENST00000471658 TNFRSF12AQ9NP84 129 aa18.54■□□□□ 0.56
PSPC1-203ENST00000471658 SLCO1B3Q9NPD5 702 aa18.54■□□□□ 0.56
PSPC1-203ENST00000471658 HRASLS2Q9NWW9 162 aa18.54■□□□□ 0.56
PSPC1-203ENST00000471658 GOLGA4Q13439 2230 aaKnown RBP18.53■□□□□ 0.56
PSPC1-203ENST00000471658 PIPSLA2A3N6 862 aa18.53■□□□□ 0.56
PSPC1-203ENST00000471658 EME2A4GXA9 379 aaPredicted RBP18.53■□□□□ 0.56
PSPC1-203ENST00000471658 LILRA5A6NI73 299 aa18.53■□□□□ 0.56
PSPC1-203ENST00000471658 NPHS1O60500 1241 aa18.53■□□□□ 0.56
PSPC1-203ENST00000471658 PROS1P07225 676 aa18.53■□□□□ 0.56
PSPC1-203ENST00000471658 AMD1P17707 334 aa18.53■□□□□ 0.56
PSPC1-203ENST00000471658 ABCE1P61221 599 aaKnown RBP18.53■□□□□ 0.56
PSPC1-203ENST00000471658 PRAMEF13Q5VWM6 474 aa18.53■□□□□ 0.56
PSPC1-203ENST00000471658 TRIM42Q8IWZ5 723 aa18.53■□□□□ 0.56
PSPC1-203ENST00000471658 OR52B6Q8NGF0 335 aa18.53■□□□□ 0.56
PSPC1-203ENST00000471658 OR2A1Q8NGT9 310 aa18.53■□□□□ 0.56
PSPC1-203ENST00000471658 FLVCR1-AS1Q8TAF5 88 aa18.53■□□□□ 0.56
PSPC1-203ENST00000471658 CNDP1Q96KN2 507 aa18.53■□□□□ 0.56
PSPC1-203ENST00000471658 PPM1MQ96MI6 270 aa18.53■□□□□ 0.56
PSPC1-203ENST00000471658 CDK15Q96Q40 435 aa18.53■□□□□ 0.56
PSPC1-203ENST00000471658 MIPEPQ99797 713 aa18.53■□□□□ 0.56
PSPC1-203ENST00000471658 TWSG1Q9GZX9 223 aa18.53■□□□□ 0.56
PSPC1-203ENST00000471658 KCNK4Q9NYG8 393 aa18.53■□□□□ 0.56
PSPC1-203ENST00000471658 ZNF225Q9UK10 706 aa18.53■□□□□ 0.56
PSPC1-203ENST00000471658 GSAPA4D1B5 854 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 TCP11X1B4DZS4 312 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 KLF11O14901 512 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 FLRT2O43155 660 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 SNNO75324 88 aaPredicted RBP18.52■□□□□ 0.56
PSPC1-203ENST00000471658 H2AFYO75367 372 aaKnown RBP18.52■□□□□ 0.56
PSPC1-203ENST00000471658 LDOC1O95751 146 aaPredicted RBP18.52■□□□□ 0.56
PSPC1-203ENST00000471658 EPB42P16452 691 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 GRK2P25098 689 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 SH3BP2P78314 561 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 DAB2P98082 770 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 CDC16Q13042 620 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 SLC14A1Q13336 389 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 RBBP7Q16576 425 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 ATG16L1Q676U5 607 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 EFL1Q7Z2Z2 1120 aaKnown RBP18.52■□□□□ 0.56
PSPC1-203ENST00000471658 TRIM73Q86UV7 250 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 RAB3IL1Q8TBN0 382 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 NEIL2Q969S2 332 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 PRR11Q96HE9 360 aaPredicted RBP18.52■□□□□ 0.56
PSPC1-203ENST00000471658 CNDP2Q96KP4 475 aaKnown RBP18.52■□□□□ 0.56
PSPC1-203ENST00000471658 SORT1Q99523 831 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 CAPS2Q9BXY5 557 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 ACTR10Q9NZ32 417 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 KLHL20Q9Y2M5 609 aa18.52■□□□□ 0.56
PSPC1-203ENST00000471658 IGHV1OR21-1A0A087WYE8 117 aa18.52■□□□□ 0.55
PSPC1-203ENST00000471658 FAM221BA6H8Z2 402 aa18.52■□□□□ 0.55
PSPC1-203ENST00000471658 OR5K3A6NET4 321 aa18.52■□□□□ 0.55
PSPC1-203ENST00000471658 E7EQ34 232 aa18.52■□□□□ 0.55
PSPC1-203ENST00000471658 KATNA1O75449 491 aa18.52■□□□□ 0.55
PSPC1-203ENST00000471658 CKMT1AP12532 417 aa18.52■□□□□ 0.55
PSPC1-203ENST00000471658 PPM1FP49593 454 aaPredicted RBP18.52■□□□□ 0.55
PSPC1-203ENST00000471658 GNGT1P63211 74 aa18.52■□□□□ 0.55
PSPC1-203ENST00000471658 AMZ1Q400G9 498 aa18.52■□□□□ 0.55
PSPC1-203ENST00000471658 CATSPEREQ5SY80 951 aa18.52■□□□□ 0.55
PSPC1-203ENST00000471658 METTL2BQ6P1Q9 378 aaKnown RBP18.52■□□□□ 0.55
PSPC1-203ENST00000471658 LCTLQ6UWM7 567 aa18.52■□□□□ 0.55
PSPC1-203ENST00000471658 FAM47EQ6ZV65 393 aa18.52■□□□□ 0.55
PSPC1-203ENST00000471658 SYVN1Q86TM6 617 aa18.52■□□□□ 0.55
PSPC1-203ENST00000471658 OOSP2Q86WS3 158 aa18.52■□□□□ 0.55
PSPC1-203ENST00000471658 ATP6V1E2Q96A05 226 aa18.52■□□□□ 0.55
PSPC1-203ENST00000471658 OR2A14Q96R47 310 aa18.52■□□□□ 0.55
PSPC1-203ENST00000471658 CUEDC1Q9NWM3 386 aaPredicted RBP18.52■□□□□ 0.55
PSPC1-203ENST00000471658 ADAM21Q9UKJ8 722 aa18.52■□□□□ 0.55
PSPC1-203ENST00000471658 PCDHB11Q9Y5F2 797 aa18.52■□□□□ 0.55
PSPC1-203ENST00000471658 EP300Q09472 2414 aaPredicted RBP18.51■□□□□ 0.55
PSPC1-203ENST00000471658 TMEM114B3SHH9 223 aa18.51■□□□□ 0.55
PSPC1-203ENST00000471658 HSPA4LO95757 839 aa18.51■□□□□ 0.55
PSPC1-203ENST00000471658 UGT2B7P16662 529 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms