RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 KRT6CP48668 564 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 NUBP1P53384 320 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 IRF8Q02556 426 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 FASTKQ14296 549 aaKnown RBP14.64□□□□□ -0.07
COL4A5-203ENST00000470339 C10orf62Q5T681 223 aaPredicted RBP14.64□□□□□ -0.07
COL4A5-203ENST00000470339 LAYNQ6UX15 382 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 RABEPKQ7Z6M1 372 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 SFRP1Q8N474 314 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 PPFIBP2Q8ND30 876 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 OR52E1Q8NGJ3 308 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 CEP70Q8NHQ1 597 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 CDK15Q96Q40 435 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 KCNA7Q96RP8 456 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 TWSG1Q9GZX9 223 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 SLC40A1Q9NP59 571 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 OR6C2Q9NZP2 312 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 CIDEBQ9UHD4 219 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 SNX6Q9UNH7 406 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 RNF11Q9Y3C5 154 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 FIS1Q9Y3D6 152 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 PCDHGA2Q9Y5H1 932 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 CSNK1G3Q9Y6M4 447 aa14.64□□□□□ -0.07
COL4A5-203ENST00000470339 HEATR5BQ9P2D3 2071 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 KCNE1BA0A087WTH5 132 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 LMO7DNF2Z398 122 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 PIP5K1BO14986 540 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 SKAP2O75563 359 aaPredicted RBP14.63□□□□□ -0.07
COL4A5-203ENST00000470339 JUNP05412 331 aaKnown RBP14.63□□□□□ -0.07
COL4A5-203ENST00000470339 SP9P0CG40 484 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 JUPP14923 745 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 SERPINB3P29508 390 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 UBE2IP63279 158 aaKnown RBP14.63□□□□□ -0.07
COL4A5-203ENST00000470339 IRX1P78414 480 aaPredicted RBP14.63□□□□□ -0.07
COL4A5-203ENST00000470339 IFT88Q13099 833 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 CHIT1Q13231 466 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 SRSF5Q13243 272 aaKnown RBP14.63□□□□□ -0.07
COL4A5-203ENST00000470339 LAPTM5Q13571 262 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 XKR6Q5GH73 641 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 PRAMEF14Q5SWL7 426 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 PRAMEF13Q5VWM6 474 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 FAM91A1Q658Y4 838 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 ATG9BQ674R7 924 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 GRHL2Q6ISB3 625 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 SLCO4C1Q6ZQN7 724 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 CEP68Q76N32 757 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 SLC9B2Q86UD5 537 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 MTDHQ86UE4 582 aaKnown RBP14.63□□□□□ -0.07
COL4A5-203ENST00000470339 SYT12Q8IV01 421 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 TRIM48Q8IWZ4 208 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 FAM46DQ8NEK8 389 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 CCT6BQ92526 530 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 PTCD3Q96EY7 689 aaKnown RBP14.63□□□□□ -0.07
COL4A5-203ENST00000470339 IL17FQ96PD4 163 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 MYLK2Q9H1R3 596 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 TUBB1Q9H4B7 451 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 WDR55Q9H6Y2 383 aaPredicted RBP14.63□□□□□ -0.07
COL4A5-203ENST00000470339 CPNE7Q9UBL6 633 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 PLAGL1Q9UM63 463 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 ICKQ9UPZ9 632 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 TIMM22Q9Y584 194 aa14.63□□□□□ -0.07
COL4A5-203ENST00000470339 A0A1B0GVT2 93 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 A0A1W2PPV9 198 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 FAM221BA6H8Z2 402 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 H0YIV9 168 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 MANBAO00462 879 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 AQP9O43315 295 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 PRICKLE3O43900 615 aaPredicted RBP14.62□□□□□ -0.07
COL4A5-203ENST00000470339 DFNA5O60443 496 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 PRAMEF4O60810 478 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 ULK1O75385 1050 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 PIAS2O75928 621 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 VIPP01282 170 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 CELA2BP08218 269 aaPredicted RBP14.62□□□□□ -0.07
COL4A5-203ENST00000470339 C1GALT1C1LP0DN25 315 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 EPHA3P29320 983 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 C1orf61Q13536 156 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 DOC2AQ14183 400 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 ANGPT1Q15389 498 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 LSM12Q3MHD2 195 aaKnown RBP14.62□□□□□ -0.07
COL4A5-203ENST00000470339 XKR7Q5GH72 579 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 PAGE2BQ5JRK9 111 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 THEMIS2Q5TEJ8 643 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 PRAMEF9Q5VWM5 478 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 FOXR1Q6PIV2 292 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 OGFOD3Q6PK18 319 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 NXPE4Q6UWF7 544 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 SUSD1Q6UWL2 747 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 LARP4Q71RC2 724 aaKnown RBP eCLIP14.62□□□□□ -0.07
COL4A5-203ENST00000470339 TRIM46Q7Z4K8 759 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 YTHDF3Q7Z739 585 aaKnown RBP14.62□□□□□ -0.07
COL4A5-203ENST00000470339 AMIGO1Q86WK6 493 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 C17orf64Q86WR6 236 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 DDIASQ8IXT1 998 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 NAGSQ8N159 534 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 FITM2Q8N6M3 262 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 LINC01555Q8NAE3 123 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 ZNF548Q8NEK5 533 aaPredicted RBP14.62□□□□□ -0.07
COL4A5-203ENST00000470339 CEP76Q8TAP6 659 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 LMX1AQ8TE12 382 aa14.62□□□□□ -0.07
COL4A5-203ENST00000470339 ZDHHC1Q8WTX9 485 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms