RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 ADH1AP07327 375 aa14.26□□□□□ -0.13
CBWD3-205ENST00000469687 MPC1LP0DKB6 136 aa14.26□□□□□ -0.13
CBWD3-205ENST00000469687 CALRP27797 417 aaKnown RBP14.26□□□□□ -0.13
CBWD3-205ENST00000469687 PREPP48147 710 aa14.26□□□□□ -0.13
CBWD3-205ENST00000469687 CTSCP53634 463 aa14.26□□□□□ -0.13
CBWD3-205ENST00000469687 PPP2R2BQ00005 443 aa14.26□□□□□ -0.13
CBWD3-205ENST00000469687 LRRC26Q2I0M4 334 aa14.26□□□□□ -0.13
CBWD3-205ENST00000469687 PLEKHS1Q5SXH7 462 aa14.26□□□□□ -0.13
CBWD3-205ENST00000469687 GPR107Q5VW38 600 aa14.26□□□□□ -0.13
CBWD3-205ENST00000469687 CES5AQ6NT32 575 aa14.26□□□□□ -0.13
CBWD3-205ENST00000469687 NOXRED1Q6NXP6 359 aa14.26□□□□□ -0.13
CBWD3-205ENST00000469687 GALNT10Q86SR1 603 aa14.26□□□□□ -0.13
CBWD3-205ENST00000469687 OR7A2PQ8NGA2 310 aa14.26□□□□□ -0.13
CBWD3-205ENST00000469687 FRS2Q8WU20 508 aa14.26□□□□□ -0.13
CBWD3-205ENST00000469687 ITCHQ96J02 903 aa14.26□□□□□ -0.13
CBWD3-205ENST00000469687 MTERF1Q99551 399 aaKnown RBP14.26□□□□□ -0.13
CBWD3-205ENST00000469687 OSBPL10Q9BXB5 764 aa14.26□□□□□ -0.13
CBWD3-205ENST00000469687 SPHK2Q9NRA0 654 aa14.26□□□□□ -0.13
CBWD3-205ENST00000469687 WNT6Q9Y6F9 365 aa14.26□□□□□ -0.13
CBWD3-205ENST00000469687 KIAA0100Q14667 2235 aaKnown RBP14.26□□□□□ -0.13
CBWD3-205ENST00000469687 PABPN1LA6NDY0 278 aaKnown RBP14.25□□□□□ -0.13
CBWD3-205ENST00000469687 RFXANKO14593 260 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 GNGT2O14610 69 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 ARHGEF15O94989 841 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 ATE1O95260 518 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 RETP07949 1114 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 PRPS2P11908 318 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 EFNA1P20827 205 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-205ENST00000469687 PRPH2P23942 346 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 VIPR1P32241 457 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 HLCSP50747 726 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 NTHL1P78549 312 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 CREMQ03060 361 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 DDX39BQ13838 428 aaKnown RBP14.25□□□□□ -0.13
CBWD3-205ENST00000469687 LRRK1Q38SD2 2015 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 PLPP4Q5VZY2 271 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 ZDHHC20Q5W0Z9 365 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 ANKRD26P1Q6NSI1 321 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 TMEM26Q6ZUK4 368 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 TMEM132CQ8N3T6 1108 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 LEMD2Q8NC56 503 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 MCOLN3Q8TDD5 553 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 GAB3Q8WWW8 586 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 TESCQ96BS2 214 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 TCF25Q9BQ70 676 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 REXO4Q9GZR2 422 aaKnown RBP14.25□□□□□ -0.13
CBWD3-205ENST00000469687 TDP1Q9NUW8 608 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 VNN3Q9NY84 501 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 ERVW-1Q9UQF0 538 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 PCDHGA8Q9Y5G5 932 aa14.25□□□□□ -0.13
CBWD3-205ENST00000469687 C16orf96A6NNT2 1141 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 WASH3PC4AMC7 463 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 E7EQ34 232 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 PER2O15055 1255 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 TSPAN6O43657 245 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 TIMP2P16035 220 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 RECQLP46063 649 aaPredicted RBP14.24□□□□□ -0.13
CBWD3-205ENST00000469687 STT3AP46977 705 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 MAPK10P53779 464 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 POLR2LP62875 67 aaKnown RBP14.24□□□□□ -0.13
CBWD3-205ENST00000469687 IRF8Q02556 426 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 SP140Q13342 867 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 HENMT1Q5T8I9 393 aaKnown RBP14.24□□□□□ -0.13
CBWD3-205ENST00000469687 CDC26Q8NHZ8 85 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 SDCCAG3Q96C92 435 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 MRGPRX3Q96LB0 322 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 ZSWIM3Q96MP5 696 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 HHIPQ96QV1 700 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 ING2Q9H160 280 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 FAM118AQ9NWS6 357 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 ITM2BQ9Y287 266 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 PCM1Q15154 2024 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 CXorf51AA0A1B0GTR3 108 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 H3BMQ9 156 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 YY2O15391 372 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 JUPP14923 745 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 PFKLP17858 780 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 EEF1B2P24534 225 aaKnown RBP14.24□□□□□ -0.13
CBWD3-205ENST00000469687 DCTP40126 519 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 BDKRB1P46663 353 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 VAC14Q08AM6 782 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 SPIDRQ14159 915 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 LAPTM4AQ15012 233 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 UGT8Q16880 541 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 XKR6Q5GH73 641 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 C1orf53Q5VUE5 145 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 TTC23LQ6PF05 361 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 BRAT1Q6PJG6 821 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 RBM23Q86U06 439 aaKnown RBP14.24□□□□□ -0.13
CBWD3-205ENST00000469687 CHPFQ8IZ52 775 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 OR52E4Q8NGH9 312 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 MED8Q96G25 268 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 COG8Q96MW5 612 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 OR4K3Q96R72 315 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 BARD1Q99728 777 aaKnown RBP14.24□□□□□ -0.13
CBWD3-205ENST00000469687 HEPHQ9BQS7 1158 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 RMND5AQ9H871 391 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 TIMMDC1Q9NPL8 285 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 EXD2Q9NVH0 621 aa14.24□□□□□ -0.13
CBWD3-205ENST00000469687 THG1LQ9NWX6 298 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms