RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 CHODLQ9H9P2 273 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 GPN2Q9H9Y4 310 aaPredicted RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 PLAC1Q9HBJ0 212 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 EIF2B3Q9NR50 452 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 SLC2A4RGQ9NR83 387 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 PNPLA3Q9NST1 481 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 ARMC1Q9NVT9 282 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 RAB20Q9NX57 234 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 HCN3Q9P1Z3 774 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 SLC17A7Q9P2U7 560 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 TBK1Q9UHD2 729 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 IL17BQ9UHF5 180 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 VPS51Q9UID3 782 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 ANAPC7Q9UJX3 599 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 BAG5Q9UL15 447 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 DNPEPQ9ULA0 475 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 CCPG1Q9ULG6 757 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 ADAMTS5Q9UNA0 930 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 RUVBL1Q9Y265 456 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 ERGIC3Q9Y282 383 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 IFT52Q9Y366 437 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 RNF11Q9Y3C5 154 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 KCTD3Q9Y597 815 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 AP4B1Q9Y6B7 739 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 CCDC168Q8NDH2 2452 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 CNTNAP2Q9UHC6 1331 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 MYH8P13535 1937 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 CSMD2Q7Z408 3487 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 NOTCH1P46531 2555 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 GON4LQ3T8J9 2241 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 TEX51A0A1B0GUA7 166 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 GSTTP1A0A1W2PQM5 241 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 TCRBV3S1A0A5B6 114 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 CLEC18AA5D8T8 446 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 MBD3L5A6NJ08 208 aaPredicted RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 TBKBP1A7MCY6 615 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 RSPH10B2B2RC85 870 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 FAM86B1E9PN63 330 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 POC1B-GALNT4F8VUJ3 575 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 SLCO1B7G3V0H7 640 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 H7C4K7 107 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 CLIC2O15247 247 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 CD3EAPO15446 510 aaKnown RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 ZNF189O75820 626 aaPredicted RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 CPNE6O95741 557 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 PIGRP01833 764 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 SERPINE1P05121 402 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 PRKCGP05129 697 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 APOA4P06727 396 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 ADRB2P07550 413 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 ALOX5P09917 674 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 FAM86B2P0C5J1 330 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 RSPH10BP0C881 870 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 DLATP10515 647 aaKnown RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 FGF3P11487 239 aaPredicted RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 MLNP12872 115 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 ETS2P15036 469 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 ZNF28P17035 718 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 CR2P20023 1033 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 BGNP21810 368 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 MYF6P23409 242 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 PPIFP30405 207 aaKnown RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 SLC6A4P31645 630 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 CNR2P34972 360 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 RFC1P35251 1148 aaPredicted RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 RPL22P35268 128 aaKnown RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 TCF7P36402 384 aaPredicted RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 BTDP43251 543 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 MRPL19P49406 292 aaKnown RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 MXI1P50539 228 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 DGKEP52429 567 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 PEX3P56589 373 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 TAS2R40P59535 323 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 RPP30P78346 268 aaKnown RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 PLIN5Q00G26 463 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 CDC20Q12834 499 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 SCARB2Q14108 478 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 DPYSL3Q14195 570 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 KCNJ11Q14654 390 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 SSPNQ14714 243 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 UBXN2BQ14CS0 331 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 EFTUD2Q15029 972 aaKnown RBP eCLIP3.38□□□□□ -1.872e-7■■□□□ 12.9
SORT1-202ENST00000466471 PCOLCEQ15113 449 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 TRIP10Q15642 601 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 TRIP13Q15645 432 aaPredicted RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 CNGA3Q16281 694 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 PHKG1Q16816 387 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 CCDC14Q49A88 953 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 DUSP28Q4G0W2 176 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 FSCBQ5H9T9 825 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 CRB2Q5IJ48 1285 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 PRR31Q5SQ13 230 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 ZNF362Q5T0B9 420 aaPredicted RBP3.38□□□□□ -1.87
SORT1-202ENST00000466471 FNBP1LQ5T0N5 605 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 CERCAMQ5T4B2 595 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 LIN9Q5TKA1 542 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 AGAP7PQ5VUJ5 663 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 TCERG1LQ5VWI1 586 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 NANOGP8Q6NSW7 305 aa3.38□□□□□ -1.87
SORT1-202ENST00000466471 ZNF529Q6P280 563 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms