RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 SGSM1Q2NKQ1 1148 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 BHLHB9Q6PI77 547 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 ZBTB49Q6ZSB9 765 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 Q6ZSR9 355 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 MMD2Q8IY49 270 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 RYBPQ8N488 228 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-205ENST00000464541 OR10G8Q8NGN5 311 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 CPNE1Q99829 537 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 GFRA4Q9GZZ7 299 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 FAM49AQ9H0Q0 323 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-205ENST00000464541 ATP13A3Q9H7F0 1226 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 Q9H8V8 135 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 PLCXD1Q9NUJ7 323 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-205ENST00000464541 A8MXE2 369 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 EPHB6O15197 1021 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 SPRY1O43609 319 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-205ENST00000464541 CSN3P07498 182 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 GSDMDP57764 484 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 POLR2LP62875 67 aaKnown RBP5.19□□□□□ -1.58
PTCD3-205ENST00000464541 RBPJQ06330 500 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 HNRNPDQ14103 355 aaKnown RBP5.19□□□□□ -1.58
PTCD3-205ENST00000464541 HERC3Q15034 1050 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 NPTX1Q15818 432 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 UGP2Q16851 508 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 XKR3Q5GH77 459 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 LCN1P1Q5VSP4 162 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 TRIM65Q6PJ69 517 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 FIP1L1Q6UN15 594 aaKnown RBP5.19□□□□□ -1.58
PTCD3-205ENST00000464541 MFN1Q8IWA4 741 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 OR8H2Q8N162 312 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 BMPERQ8N8U9 685 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 LINC00479Q96M42 142 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 KRT12Q99456 494 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 WDR37Q9Y2I8 494 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 TMED3Q9Y3Q3 217 aa5.19□□□□□ -1.58
PTCD3-205ENST00000464541 IGKV3D-15A0A087WSY6 115 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 KRT33AO76009 404 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 CELF2O95319 508 aaKnown RBP5.18□□□□□ -1.58
PTCD3-205ENST00000464541 DNTTP04053 509 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 CD22P20273 847 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 ACHEP22303 614 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 SP3Q02447 781 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 RPUSD3Q6P087 351 aaKnown RBP5.18□□□□□ -1.58
PTCD3-205ENST00000464541 CHST3Q7LGC8 479 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 LACC1Q8IV20 430 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 LGI2Q8N0V4 545 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 ZNF614Q8N883 585 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 OR4K1Q8NGD4 311 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 OR2T6Q8NHC8 308 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 PIGBQ92521 554 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 ZNF653Q96CK0 615 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 POM121L2Q96KW2 1035 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 SLC25A23Q9BV35 468 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 ZMYND12Q9H0C1 365 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 SHARPINQ9H0F6 387 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 TLE6Q9H808 572 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 TERF2IPQ9NYB0 399 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 CLIC5Q9NZA1 410 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 WDR35Q9P2L0 1181 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 EPHA6Q9UF33 1036 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 C19orf25Q9UFG5 118 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-205ENST00000464541 TNNQ9UQP3 1299 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 WDR83OSQ9Y284 106 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 EXOGQ9Y2C4 368 aaKnown RBP5.18□□□□□ -1.58
PTCD3-205ENST00000464541 CCL27Q9Y4X3 112 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 PRSS21Q9Y6M0 314 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 RNF215Q9Y6U7 377 aa5.18□□□□□ -1.58
PTCD3-205ENST00000464541 GGPS1O95749 300 aa5.17□□□□□ -1.58
PTCD3-205ENST00000464541 KRT20P35900 424 aa5.17□□□□□ -1.58
PTCD3-205ENST00000464541 VAMP7P51809 220 aa5.17□□□□□ -1.58
PTCD3-205ENST00000464541 ACSM1Q08AH1 577 aa5.17□□□□□ -1.58
PTCD3-205ENST00000464541 VEZF1Q14119 521 aa5.17□□□□□ -1.58
PTCD3-205ENST00000464541 SQLEQ14534 574 aa5.17□□□□□ -1.58
PTCD3-205ENST00000464541 KCTD2Q14681 263 aa5.17□□□□□ -1.58
PTCD3-205ENST00000464541 SLC25A53Q5H9E4 307 aa5.17□□□□□ -1.58
PTCD3-205ENST00000464541 UGT3A1Q6NUS8 523 aa5.17□□□□□ -1.58
PTCD3-205ENST00000464541 DCLK2Q8N568 766 aa5.17□□□□□ -1.58
PTCD3-205ENST00000464541 PI4KAP1Q8N8J0 262 aa5.17□□□□□ -1.58
PTCD3-205ENST00000464541 RMDN1Q96DB5 314 aa5.17□□□□□ -1.58
PTCD3-205ENST00000464541 FAM71F1Q96KD3 344 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-205ENST00000464541 SYT15Q9BQS2 421 aa5.17□□□□□ -1.58
PTCD3-205ENST00000464541 TRIM51Q9BSJ1 452 aa5.17□□□□□ -1.58
PTCD3-205ENST00000464541 MCRIP2Q9BUT9 160 aaKnown RBP5.17□□□□□ -1.58
PTCD3-205ENST00000464541 PRRG4Q9BZD6 226 aa5.17□□□□□ -1.58
PTCD3-205ENST00000464541 TBC1D7Q9P0N9 293 aa5.17□□□□□ -1.58
PTCD3-205ENST00000464541 RNF150Q9ULK6 438 aa5.17□□□□□ -1.58
PTCD3-205ENST00000464541 NDUFAF8A1L188 74 aa5.16□□□□□ -1.58
PTCD3-205ENST00000464541 ZNF500O60304 480 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-205ENST00000464541 ERCC2P18074 760 aa5.16□□□□□ -1.58
PTCD3-205ENST00000464541 SLC6A12P48065 614 aa5.16□□□□□ -1.58
PTCD3-205ENST00000464541 CLDN15P56746 228 aa5.16□□□□□ -1.58
PTCD3-205ENST00000464541 KRTAP10-7P60409 375 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-205ENST00000464541 SLC25A47Q6Q0C1 308 aa5.16□□□□□ -1.58
PTCD3-205ENST00000464541 ZNF497Q6ZNH5 498 aa5.16□□□□□ -1.58
PTCD3-205ENST00000464541 TLK2Q86UE8 772 aa5.16□□□□□ -1.58
PTCD3-205ENST00000464541 KRTAP7-1Q8IUC3 87 aa5.16□□□□□ -1.58
PTCD3-205ENST00000464541 RASGEF1AQ8N9B8 481 aa5.16□□□□□ -1.58
PTCD3-205ENST00000464541 NOA1Q8NC60 698 aaKnown RBP5.16□□□□□ -1.58
PTCD3-205ENST00000464541 ZNRF4Q8WWF5 429 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms