RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 FAM8A1Q9UBU6 413 aa14.12□□□□□ -0.15
COL5A1-205ENST00000464187 LEF1Q9UJU2 399 aaPredicted RBP14.12□□□□□ -0.15
COL5A1-205ENST00000464187 RAB26Q9ULW5 256 aa14.12□□□□□ -0.15
COL5A1-205ENST00000464187 CYP8B1Q9UNU6 501 aa14.12□□□□□ -0.15
COL5A1-205ENST00000464187 EIF3FO00303 357 aaPredicted RBP14.11□□□□□ -0.15
COL5A1-205ENST00000464187 DENRO43583 198 aaKnown RBP14.11□□□□□ -0.15
COL5A1-205ENST00000464187 STAMBPO95630 424 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 SEMA4FO95754 770 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 GRIA3P42263 894 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 EMX2Q04743 252 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 BNIP2Q12982 314 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 NR6A1Q15406 480 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 TIGD2Q4W5G0 525 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 IRAK1BP1Q5VVH5 260 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 UGT2A3Q6UWM9 527 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 ZNF547Q8IVP9 402 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 MARVELD2Q8N4S9 558 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 ASB12Q8WXK4 309 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 CD320Q9NPF0 282 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 TMEM45AQ9NWC5 275 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 GULP1Q9UBP9 304 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 GPR34Q9UPC5 381 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 CCL27Q9Y4X3 112 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 POLR3HQ9Y535 204 aaPredicted RBP14.11□□□□□ -0.15
COL5A1-205ENST00000464187 CROCCQ5TZA2 2017 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 K7EPI3 171 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 NUAK1O60285 661 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 PAX7P23759 505 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 PBLDP30039 288 aaPredicted RBP14.11□□□□□ -0.15
COL5A1-205ENST00000464187 SPATS1Q496A3 300 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 SYTL3Q4VX76 610 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 LCN8Q6JVE9 175 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 HMBOX1Q6NT76 420 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 CRTC3Q6UUV7 619 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 CHCHD4Q8N4Q1 142 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 LILRA3Q8N6C8 439 aaPredicted RBP14.11□□□□□ -0.15
COL5A1-205ENST00000464187 FAM110BQ8TC76 370 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 SKA2Q8WVK7 121 aaPredicted RBP14.11□□□□□ -0.15
COL5A1-205ENST00000464187 CLDN23Q96B33 292 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 TMEM159Q96B96 161 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 TPSD1Q9BZJ3 242 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 SEMA6AQ9H2E6 1030 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 CHRDQ9H2X0 955 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 ACTL8Q9H568 366 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 PHPT1Q9NRX4 125 aaPredicted RBP14.11□□□□□ -0.15
COL5A1-205ENST00000464187 EGFL7Q9UHF1 273 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 ANGPTL3Q9Y5C1 460 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 PCYT1BQ9Y5K3 369 aaPredicted RBP14.11□□□□□ -0.15
COL5A1-205ENST00000464187 AP4B1Q9Y6B7 739 aa14.11□□□□□ -0.15
COL5A1-205ENST00000464187 C15orf38-AP3S2A0A0A6YYH1 394 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 ANKRD28O15084 1053 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 SLCO2B1O94956 709 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 G6PDP11413 515 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 MYCLP1P12525 358 aaPredicted RBP14.1□□□□□ -0.15
COL5A1-205ENST00000464187 ZNF26P17031 533 aaPredicted RBP14.1□□□□□ -0.15
COL5A1-205ENST00000464187 PIK3CGP48736 1102 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 GSK3BP49841 420 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 CDKL1Q00532 357 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 RABL3Q5HYI8 236 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 RNF220Q5VTB9 566 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 FOXB2Q5VYV0 432 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 CYP20A1Q6UW02 462 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 ARPINQ7Z6K5 226 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 KIAA2013Q8IYS2 634 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 GALNT4Q8N4A0 578 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 SPEM1Q8N4L4 309 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 DNAJB14Q8TBM8 379 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 CANT1Q8WVQ1 401 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 FOXJ1Q92949 421 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 TOE1Q96GM8 510 aaKnown RBP14.1□□□□□ -0.15
COL5A1-205ENST00000464187 LINC00615Q96LM1 132 aaPredicted RBP14.1□□□□□ -0.15
COL5A1-205ENST00000464187 TRIM15Q9C019 465 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 SLAMF8Q9P0V8 285 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 ACTR3BQ9P1U1 418 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 CNOT11Q9UKZ1 510 aaKnown RBP14.1□□□□□ -0.15
COL5A1-205ENST00000464187 SIT1Q9Y3P8 196 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 PRKAB1Q9Y478 270 aa14.1□□□□□ -0.15
COL5A1-205ENST00000464187 SLC5A10A0PJK1 596 aa14.09□□□□□ -0.15
COL5A1-205ENST00000464187 POM121BA6NF01 834 aa14.09□□□□□ -0.15
COL5A1-205ENST00000464187 AQP12BA6NM10 295 aa14.09□□□□□ -0.15
COL5A1-205ENST00000464187 FFAR3O14843 346 aa14.09□□□□□ -0.15
COL5A1-205ENST00000464187 ARPC2O15144 300 aa14.09□□□□□ -0.15
COL5A1-205ENST00000464187 GPR42O15529 346 aa14.09□□□□□ -0.15
COL5A1-205ENST00000464187 LATO43561 262 aa14.09□□□□□ -0.15
COL5A1-205ENST00000464187 ZNF217O75362 1048 aa14.09□□□□□ -0.15
COL5A1-205ENST00000464187 POP7O75817 140 aaKnown RBP14.09□□□□□ -0.15
COL5A1-205ENST00000464187 HNRNPA2B1P22626 353 aaKnown RBP14.09□□□□□ -0.15
COL5A1-205ENST00000464187 PREPP48147 710 aa14.09□□□□□ -0.15
COL5A1-205ENST00000464187 PXNP49023 591 aaPredicted RBP14.09□□□□□ -0.15
COL5A1-205ENST00000464187 CHN2P52757 468 aa14.09□□□□□ -0.15
COL5A1-205ENST00000464187 PRKG2Q13237 762 aa14.09□□□□□ -0.15
COL5A1-205ENST00000464187 AP5B1Q2VPB7 878 aa14.09□□□□□ -0.15
COL5A1-205ENST00000464187 ZNF658BQ4V348 819 aaPredicted RBP14.09□□□□□ -0.15
COL5A1-205ENST00000464187 MTX3Q5HYI7 312 aa14.09□□□□□ -0.15
COL5A1-205ENST00000464187 METTL2BQ6P1Q9 378 aaKnown RBP14.09□□□□□ -0.15
COL5A1-205ENST00000464187 RNF165Q6ZSG1 346 aa14.09□□□□□ -0.15
COL5A1-205ENST00000464187 C11orf96Q7Z7L8 435 aa14.09□□□□□ -0.15
COL5A1-205ENST00000464187 AQP12AQ8IXF9 295 aa14.09□□□□□ -0.15
COL5A1-205ENST00000464187 DENND6BQ8NEG7 585 aa14.09□□□□□ -0.15
COL5A1-205ENST00000464187 RLN3Q8WXF3 142 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms