RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 GDF5P43026 501 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 RGS4P49798 205 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 SLC18A1P54219 525 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 NAGLUP54802 743 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 ROR2Q01974 943 aaKnown RBP10.04□□□□□ -0.8
USP39-210ENST00000459775 ELOAQ14241 798 aaKnown RBP10.04□□□□□ -0.8
USP39-210ENST00000459775 CLCA4Q14CN2 919 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 TGFBIQ15582 683 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 PPP1R3AQ16821 1122 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 TTLL9Q3SXZ7 439 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 CCDC153Q494R4 210 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 PLK5Q496M5 336 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.04□□□□□ -0.8
USP39-210ENST00000459775 PLEKHS1Q5SXH7 462 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 KLC3Q6P597 504 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 ZYG11AQ6WRX3 759 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 SLC36A4Q6YBV0 504 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 FAM47EQ6ZV65 393 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 UBE2R2Q712K3 238 aaPredicted RBP10.04□□□□□ -0.8
USP39-210ENST00000459775 NRROSQ86YC3 692 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 GPSM1Q86YR5 675 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 C2orf73Q8N5S3 287 aaPredicted RBP10.04□□□□□ -0.8
USP39-210ENST00000459775 CCNYL1Q8N7R7 359 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 CKAP2Q8WWK9 683 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 PATE1Q8WXA2 126 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 ASB11Q8WXH4 323 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 SCARF2Q96GP6 870 aaPredicted RBP10.04□□□□□ -0.8
USP39-210ENST00000459775 PDLIM5Q96HC4 596 aaKnown RBP10.04□□□□□ -0.8
USP39-210ENST00000459775 ZNF514Q96K75 400 aaPredicted RBP10.04□□□□□ -0.8
USP39-210ENST00000459775 LINC00615Q96LM1 132 aaPredicted RBP10.04□□□□□ -0.8
USP39-210ENST00000459775 NSUN5Q96P11 429 aaKnown RBP10.04□□□□□ -0.8
USP39-210ENST00000459775 TMEM237Q96Q45 408 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 OR52A5Q9H2C5 316 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 TFB2MQ9H5Q4 396 aaKnown RBP10.04□□□□□ -0.8
USP39-210ENST00000459775 PDE10AQ9Y233 779 aa10.04□□□□□ -0.8
USP39-210ENST00000459775 TRAV6A0A075B6T7 132 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 ARHGEF33A8MVX0 844 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 PATE3B3GLJ2 98 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 TLR4O00206 839 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 BCAT2O15382 392 aaPredicted RBP10.03□□□□□ -0.8
USP39-210ENST00000459775 TSC22D2O75157 780 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 HOXC4P09017 264 aaPredicted RBP10.03□□□□□ -0.8
USP39-210ENST00000459775 LSP1P33241 339 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 CDH13P55290 713 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 YPEL5P62699 121 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 RACK1P63244 317 aaKnown RBP10.03□□□□□ -0.8
USP39-210ENST00000459775 METRNLQ641Q3 311 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 PMS2CLQ68D20 193 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 SLC22A15Q8IZD6 547 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 PTGR2Q8N8N7 351 aaPredicted RBP10.03□□□□□ -0.8
USP39-210ENST00000459775 OR5AR1Q8NGP9 310 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 STAG3L4Q8TBR4 150 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 HM13Q8TCT9 377 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 DNASE2BQ8WZ79 361 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 PIGKQ92643 395 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 INTS12Q96CB8 462 aaKnown RBP10.03□□□□□ -0.8
USP39-210ENST00000459775 OR2M4Q96R27 311 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 CCT7Q99832 543 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 GATA5Q9BWX5 397 aaPredicted RBP10.03□□□□□ -0.8
USP39-210ENST00000459775 TSSK1BQ9BXA7 367 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 ZDHHC5Q9C0B5 715 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 WNT5BQ9H1J7 359 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 SMOC1Q9H4F8 434 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 GPR27Q9NS67 375 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 ABCF3Q9NUQ8 709 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 OXSMQ9NWU1 459 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 NCKIPSDQ9NZQ3 722 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 CD274Q9NZQ7 290 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 A0A1B0GTL3 188 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 PDZK1P1A8MUH7 402 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 LIN7AO14910 233 aaPredicted RBP10.03□□□□□ -0.8
USP39-210ENST00000459775 KERAO60938 352 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 MATN4O95460 622 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 CHRNGP07510 517 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 RETP07949 1114 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 RBP1P09455 135 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 GFAPP14136 432 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 ACADLP28330 430 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 ACTR1BP42025 376 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 ACTR1AP61163 376 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 ATP6V0D1P61421 351 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 IL9RQ01113 521 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 BNC1Q01954 994 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 BST1Q10588 318 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 OVGP1Q12889 678 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 TRAP1Q12931 704 aaKnown RBP10.03□□□□□ -0.8
USP39-210ENST00000459775 PRRT3Q5FWE3 981 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 LYSMD4Q5XG99 296 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 PRR23BQ6ZRT6 265 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 LRRC34Q8IZ02 419 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 OXR1Q8N573 874 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 DCBLD1Q8N8Z6 715 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 MFSD2AQ8NA29 543 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 PPFIBP2Q8ND30 876 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 OR6C4Q8NGE1 309 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 OR2I1PQ8NGU4 316 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 AGR3Q8TD06 166 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 PYCR2Q96C36 320 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 CATSPER2Q96P56 530 aa10.03□□□□□ -0.8
USP39-210ENST00000459775 INSM2Q96T92 566 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms