RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 RUVBL1Q9Y265 456 aaKnown RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 POFUT2Q9Y2G5 429 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 MED16Q9Y2X0 877 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 TSC22D4Q9Y3Q8 395 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 TRIM17Q9Y577 477 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 PCDHB9Q9Y5E1 797 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 PCDHB7Q9Y5E2 793 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 PCDHGC4Q9Y5F7 938 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 PEX16Q9Y5Y5 336 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 GPC6Q9Y625 555 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 A3GALT2U3KPV4 340 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 FRMPD3Q5JV73 1810 aa3.25□□□□□ -1.89
HMGN1P18-201ENST00000457642 EP400Q96L91 3159 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 MICAL3Q7RTP6 2002 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 TRBV5-3A0A0A0MS03 114 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 TRBV5-4A0A0C4DH59 114 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 A0A1B0GTL3 188 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 SERTM1A2A2V5 107 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 OR2A25A4D2G3 310 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 KRBA1A5PL33 1030 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CARNS1A5YM72 827 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 TRIM43BA6NCK2 446 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF840PA6NDX5 716 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 EFCAB10A6NFE3 127 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 IQCF5A8MTL0 148 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PDZK1P1A8MUH7 402 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 MAGEB17A8MXT2 336 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 LOC730098B7Z3J9 87 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 NPIPB8E9PQR5 432 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 LOC110117498-PIK3R3F6TDL0 507 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 F8W810 466 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 H0Y858 1186 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 H3BNC9 293 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 TMX2-CTNND1H3BSU7 103 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CLIC1O00299 241 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF197O14709 1029 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 AQP9O43315 295 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 B4GAT1O43505 415 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 XPNPEP2O43895 674 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 AIREO43918 545 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 FOXD2O60548 495 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 TSPAN3O60637 253 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 DPM1O60762 260 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ADAMTS4O75173 837 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 XYLBO75191 536 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 COQ9O75208 318 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 GJB3O75712 270 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 STC2O76061 302 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 AP2A2O94973 939 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 INMTO95050 263 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CPSF4O95639 269 aaKnown RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PDYNP01213 254 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 TRBC1P01850 177 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 C9P02748 559 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 MT-ND2P03891 347 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 RPLP0P05388 317 aaKnown RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 KRT8P05787 483 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CYP2A6P11509 494 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 MYCLP1P12525 358 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CYP4B1P13584 511 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ANXA8P13928 327 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 JUPP14923 745 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 TCF3P15923 654 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CD36P16671 472 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ENGP17813 658 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 POLR2EP19388 210 aaKnown RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 AGXTP21549 392 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PCMT1P22061 227 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 FMO3P31513 532 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 UGT2B10P36537 528 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 POLR2IP36954 125 aaKnown RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PIGAP37287 484 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 HNF4AP41235 474 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PIK3CBP42338 1070 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CTSKP43235 329 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 MAGEA2P43356 314 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 RGRP47804 291 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ALDH9A1P49189 494 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 RPIAP49247 311 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CDKN1CP49918 316 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF157P51786 506 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PPP5CP53041 499 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 IST1P53990 364 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 EPHB3P54753 998 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 GP2P55259 537 aaKnown RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ISL1P61371 349 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 LSM3P62310 102 aaKnown RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 SNRPD1P62314 119 aaKnown RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 NKX3-2P78367 333 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 SLC35A2P78381 396 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 FAM189BP81408 668 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF45Q02386 682 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 IRF8Q02556 426 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 EMX1Q04741 257 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CDC20Q12834 499 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 DUSP4Q13115 394 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PLD1Q13393 1074 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 AQP6Q13520 282 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CAMK2GQ13555 558 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 VEZF1Q14119 521 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms