RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 FBXO8Q9NRD0 319 aa9.7□□□□□ -0.86
ATG4A-206ENST00000457035 SIDT1Q9NXL6 827 aaKnown RBP9.7□□□□□ -0.86
ATG4A-206ENST00000457035 AKAP7Q9P0M2 348 aaPredicted RBP9.7□□□□□ -0.86
ATG4A-206ENST00000457035 DKK4Q9UBT3 224 aa9.7□□□□□ -0.86
ATG4A-206ENST00000457035 BTRCQ9Y297 605 aa9.7□□□□□ -0.86
ATG4A-206ENST00000457035 IKBKGQ9Y6K9 419 aa9.7□□□□□ -0.86
ATG4A-206ENST00000457035 BAHCC1Q9P281 2608 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 NVLO15381 856 aaKnown RBP9.69□□□□□ -0.86
ATG4A-206ENST00000457035 BRINP1O60477 761 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 PRAMEF10O60809 474 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 KRT38O76015 456 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 TNFSF15O95150 251 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 SYF2O95926 243 aaKnown RBP9.69□□□□□ -0.86
ATG4A-206ENST00000457035 SHBGP04278 402 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 TUBBP07437 444 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 ENO2P09104 434 aaPredicted RBP9.69□□□□□ -0.86
ATG4A-206ENST00000457035 HIST1H2AGP0C0S8 130 aaPredicted RBP9.69□□□□□ -0.86
ATG4A-206ENST00000457035 JMJD7P0C870 316 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 PVRP15151 417 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 FOLR1P15328 257 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 HIST1H2ADP20671 130 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 CNTFP26441 200 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 TYK2P29597 1187 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 OAS2P29728 719 aaKnown RBP9.69□□□□□ -0.86
ATG4A-206ENST00000457035 SLC26A3P40879 764 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 GCGRP47871 477 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 AP1S2P56377 157 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 ATP6V0D1P61421 351 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 YBX1P67809 324 aaKnown RBP9.69□□□□□ -0.86
ATG4A-206ENST00000457035 HSD11B2P80365 405 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 CSHL1Q14406 222 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 KCNAB1Q14722 419 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 TSNQ15631 228 aaKnown RBP9.69□□□□□ -0.86
ATG4A-206ENST00000457035 ZIC1Q15915 447 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 COL28A1Q2UY09 1125 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 KIAA1614Q5VZ46 1190 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 FOXR1Q6PIV2 292 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 SUSD1Q6UWL2 747 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 MBOAT1Q6ZNC8 495 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 TIFABQ6ZNK6 161 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 RAPH1Q70E73 1250 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 CCDC91Q7Z6B0 441 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 ISCA2Q86U28 154 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 TRIM73Q86UV7 250 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 TAX1BP1Q86VP1 789 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 CENPLQ8N0S6 344 aaPredicted RBP9.69□□□□□ -0.86
ATG4A-206ENST00000457035 RAB42Q8N4Z0 105 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 PPFIBP2Q8ND30 876 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 NBEAQ8NFP9 2946 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 HNRNPLLQ8WVV9 542 aaKnown RBP9.69□□□□□ -0.86
ATG4A-206ENST00000457035 UBLCP1Q8WVY7 318 aaPredicted RBP9.69□□□□□ -0.86
ATG4A-206ENST00000457035 SMPDL3AQ92484 453 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 USP7Q93009 1102 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 CAVIN3Q969G5 261 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 KIAA1191Q96A73 305 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 PTERQ96BW5 349 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 NXNL1Q96CM4 212 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 NXPE2Q96DL1 559 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 HIST1H2AHQ96KK5 128 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 GPR78Q96P69 363 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 TAAR9Q96RI9 348 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 HIST1H2AJQ99878 128 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 CCDC77Q9BR77 488 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 H2AFJQ9BTM1 129 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 TMUB1Q9BVT8 246 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 TRIM54Q9BYV2 358 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 UNKQ9C0B0 810 aaKnown RBP9.69□□□□□ -0.86
ATG4A-206ENST00000457035 CHRNA10Q9GZZ6 450 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 APMAPQ9HDC9 416 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 SNX15Q9NRS6 342 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 IGSF5Q9NSI5 407 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 SLC39A1Q9NY26 324 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 SCN3AQ9NY46 2000 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 STOX2Q9P2F5 926 aaPredicted RBP9.69□□□□□ -0.86
ATG4A-206ENST00000457035 CTNNAL1Q9UBT7 734 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 PISDQ9UG56 409 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 PTPRQQ9UMZ3 2332 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 ACOT9Q9Y305 439 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 PCDHGA7Q9Y5G6 932 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 PCDHGA3Q9Y5H0 932 aa9.69□□□□□ -0.86
ATG4A-206ENST00000457035 A0A096LPK6 155 aa9.68□□□□□ -0.86
ATG4A-206ENST00000457035 A0A0J9YY10 115 aa9.68□□□□□ -0.86
ATG4A-206ENST00000457035 NPEPPSL1A6NEC2 478 aa9.68□□□□□ -0.86
ATG4A-206ENST00000457035 ZNF839A8K0R7 811 aa9.68□□□□□ -0.86
ATG4A-206ENST00000457035 C9orf172C9J069 976 aa9.68□□□□□ -0.86
ATG4A-206ENST00000457035 TRIM49D1C9J1S8 452 aa9.68□□□□□ -0.86
ATG4A-206ENST00000457035 RFPL1O75677 317 aa9.68□□□□□ -0.86
ATG4A-206ENST00000457035 FKBP9O95302 570 aa9.68□□□□□ -0.86
ATG4A-206ENST00000457035 SNRPAP09012 282 aaKnown RBP9.68□□□□□ -0.86
ATG4A-206ENST00000457035 LTA4HP09960 611 aaKnown RBP9.68□□□□□ -0.86
ATG4A-206ENST00000457035 PSMB5P28074 263 aa9.68□□□□□ -0.86
ATG4A-206ENST00000457035 RBMS1P29558 406 aaKnown RBP9.68□□□□□ -0.86
ATG4A-206ENST00000457035 SLC5A2P31639 672 aa9.68□□□□□ -0.86
ATG4A-206ENST00000457035 GRIA3P42263 894 aa9.68□□□□□ -0.86
ATG4A-206ENST00000457035 GABRA4P48169 554 aa9.68□□□□□ -0.86
ATG4A-206ENST00000457035 SERPINB8P50452 374 aa9.68□□□□□ -0.86
ATG4A-206ENST00000457035 MAPK10P53779 464 aa9.68□□□□□ -0.86
ATG4A-206ENST00000457035 ERVPABLB-1P60509 514 aa9.68□□□□□ -0.86
ATG4A-206ENST00000457035 CDKL1Q00532 357 aa9.68□□□□□ -0.86
ATG4A-206ENST00000457035 IRF9Q00978 393 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms