RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 CHN1P15882 459 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 CSF2RBP32927 897 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 LSSP48449 732 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 ATP1A2P50993 1020 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 NAGLUP54802 743 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 CDH13P55290 713 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 ZNF678Q5SXM1 525 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 ZNF574Q6ZN55 896 aaPredicted RBP10.37□□□□□ -0.75
SYPL1-202ENST00000455385 ATG14Q6ZNE5 492 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 RAB42Q8N4Z0 105 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 OR6Y1Q8NGX8 325 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 NCSTNQ92542 709 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 L3HYPDHQ96EM0 354 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 CDC6Q99741 560 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 NUDT22Q9BRQ3 303 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 GATA5Q9BWX5 397 aaPredicted RBP10.37□□□□□ -0.75
SYPL1-202ENST00000455385 ABCG4Q9H172 646 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 LRRN3Q9H3W5 708 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 SLC32A1Q9H598 525 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 CNOT10Q9H9A5 744 aaKnown RBP10.37□□□□□ -0.75
SYPL1-202ENST00000455385 ZBTB26Q9HCK0 441 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 ACTR10Q9NZ32 417 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 TMEM9Q9P0T7 183 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 TMCO1Q9UM00 188 aa10.37□□□□□ -0.75
SYPL1-202ENST00000455385 CNOT1A5YKK6 2376 aaKnown RBP10.37□□□□□ -0.75
SYPL1-202ENST00000455385 ISM1B1AKI9 464 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 KIF1CO43896 1103 aaKnown RBP10.36□□□□□ -0.75
SYPL1-202ENST00000455385 PRAMEF4O60810 478 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 TRIM13O60858 407 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 RPLP0P05388 317 aaKnown RBP10.36□□□□□ -0.75
SYPL1-202ENST00000455385 RPS17P08708 135 aaKnown RBP10.36□□□□□ -0.75
SYPL1-202ENST00000455385 FGF3P11487 239 aaPredicted RBP10.36□□□□□ -0.75
SYPL1-202ENST00000455385 UGT2B7P16662 529 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 TSPAN8P19075 237 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 PRDX3P30048 256 aaKnown RBP10.36□□□□□ -0.75
SYPL1-202ENST00000455385 CCR10P46092 362 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 CAPZBP47756 277 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 GFERP55789 205 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 DNAJB13P59910 316 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 HERVK_113P63132 956 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 GPLD1P80108 840 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 SQSTM1Q13501 440 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 TRIP6Q15654 476 aaKnown RBP10.36□□□□□ -0.75
SYPL1-202ENST00000455385 HHATQ5VTY9 493 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 PRAMEF9Q5VWM5 478 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 CAPN13Q6MZZ7 669 aaPredicted RBP10.36□□□□□ -0.75
SYPL1-202ENST00000455385 ZCCHC23Q6ZST2 131 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 OOSP2Q86WS3 158 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 NUDCD3Q8IVD9 361 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 SLC22A9Q8IVM8 553 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 NETO1Q8TDF5 533 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 AHCYL2Q96HN2 611 aaKnown RBP10.36□□□□□ -0.75
SYPL1-202ENST00000455385 C1QTNF3Q9BXJ4 246 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 ERVK-6Q9BXR3 956 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 CCDC177Q9NQR7 707 aaPredicted RBP10.36□□□□□ -0.75
SYPL1-202ENST00000455385 EVA1BQ9NVM1 165 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 TAC3Q9UHF0 121 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 PCTPQ9UKL6 214 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 HEATR5BQ9P2D3 2071 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 IGKV1-8A0A0C4DH67 115 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 A0A1B0GTL3 188 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 GSAPA4D1B5 854 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 ZNF839A8K0R7 811 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 C2orf74A8MZ97 194 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 K7EPI3 171 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 BIRC5O15392 142 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 CAPN5O15484 640 aaPredicted RBP10.36□□□□□ -0.75
SYPL1-202ENST00000455385 GP1BAP07359 652 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 MPSTP25325 297 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 OAS2P29728 719 aaKnown RBP10.36□□□□□ -0.75
SYPL1-202ENST00000455385 ARRB2P32121 409 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 KIR2DS3Q14952 304 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 SF1Q15637 639 aaKnown RBP10.36□□□□□ -0.75
SYPL1-202ENST00000455385 LIPMQ5VYY2 423 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 KIAA1614Q5VZ46 1190 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 FAM219BQ5XKK7 198 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 TRIM73Q86UV7 250 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 TEX9Q8N6V9 391 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 CCNYL1Q8N7R7 359 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 ZNF483Q8TF39 744 aaPredicted RBP10.36□□□□□ -0.75
SYPL1-202ENST00000455385 NEIL2Q969S2 332 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 CCDC126Q96EE4 140 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 MIPEPQ99797 713 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 RAB33BQ9H082 229 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 OPTCQ9UBM4 332 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 EPHA6Q9UF33 1036 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 MID2Q9UJV3 735 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 KLHL20Q9Y2M5 609 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 PCDHB11Q9Y5F2 797 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 TNPO3Q9Y5L0 923 aaKnown RBP10.36□□□□□ -0.75
SYPL1-202ENST00000455385 ENTPD2Q9Y5L3 495 aa10.36□□□□□ -0.75
SYPL1-202ENST00000455385 NTN3O00634 580 aaPredicted RBP10.35□□□□□ -0.75
SYPL1-202ENST00000455385 GIPC1O14908 333 aa10.35□□□□□ -0.75
SYPL1-202ENST00000455385 NRP2O60462 931 aa10.35□□□□□ -0.75
SYPL1-202ENST00000455385 PRAMEF10O60809 474 aa10.35□□□□□ -0.75
SYPL1-202ENST00000455385 SUPT7LO94864 414 aa10.35□□□□□ -0.75
SYPL1-202ENST00000455385 BGNP21810 368 aa10.35□□□□□ -0.75
SYPL1-202ENST00000455385 PPM1FP49593 454 aaPredicted RBP10.35□□□□□ -0.75
SYPL1-202ENST00000455385 PRDX1Q06830 199 aaKnown RBP10.35□□□□□ -0.75
SYPL1-202ENST00000455385 PRKAA1Q13131 559 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms