RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 TRBV23OR9-2A0A075B6M9 112 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 GRXCR1A8MXD5 290 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 FZD6O60353 706 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 XYLBO75191 536 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 GNRH1P01148 92 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 EBLN1P0CF75 366 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 CTSAP10619 480 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 ENGP17813 658 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 TNFRSF1BP20333 461 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 CHI3L1P36222 383 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-213ENST00000454468 CAPGP40121 348 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 ALG1LQ6GMV1 187 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 LCN8Q6JVE9 175 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 THOC6Q86W42 341 aaKnown RBP11.64□□□□□ -0.55
SMPD4-213ENST00000454468 NETO1Q8TDF5 533 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 UTP15Q8TED0 518 aaKnown RBP11.64□□□□□ -0.55
SMPD4-213ENST00000454468 CLP1Q92989 425 aaKnown RBP11.64□□□□□ -0.55
SMPD4-213ENST00000454468 NRBF2Q96F24 287 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 SLC6A13Q9NSD5 602 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 EBF1Q9UH73 591 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 DMTF1Q9Y222 760 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 SAMHD1Q9Y3Z3 626 aaKnown RBP11.64□□□□□ -0.55
SMPD4-213ENST00000454468 DYRK1BQ9Y463 629 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 MAP4K5Q9Y4K4 846 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 KCNE2Q9Y6J6 123 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 SCN5AQ14524 2016 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 TSC2P49815 1807 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 RAP2AP10114 183 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 HRH2P25021 359 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 MAPK1P28482 360 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 CDKN2CP42773 168 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 OCA2Q04671 838 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 TMEM115Q12893 351 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-213ENST00000454468 CAMK2GQ13555 558 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-213ENST00000454468 SPDYE7PQ495Y7 208 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 C16orf87Q6PH81 154 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 ELMSAN1Q6PJG2 1045 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 HTR3DQ70Z44 454 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 OR2A12Q8NGT7 310 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 ALG14Q96F25 216 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 ZNF597Q96LX8 424 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 TOR3AQ9H497 397 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 AGPAT4Q9NRZ5 378 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 ERVW-1Q9UQF0 538 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 SH3GLB1Q9Y371 365 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 NINQ8N4C6 2090 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 ZFC3H1O60293 1989 aaKnown RBP11.64□□□□□ -0.55
SMPD4-213ENST00000454468 DYTNA2CJ06 578 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 TRIM43BA6NCK2 446 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 ANTXRLA6NF34 631 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 MAGEB17A8MXT2 336 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 CLIC1O00299 241 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 MITFO75030 526 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-213ENST00000454468 ATG13O75143 517 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 CREG1O75629 220 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 C1QCP02747 245 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 IL6P05231 212 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 EPORP19235 508 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 PSMD8P48556 350 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 IDH2P48735 452 aaKnown RBP11.63□□□□□ -0.55
SMPD4-213ENST00000454468 XKR7Q5GH72 579 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 NOXRED1Q6NXP6 359 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 ZNF783Q6ZMS7 281 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 PLD3Q8IV08 490 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 ZDHHC21Q8IVQ6 265 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 TNIP2Q8NFZ5 429 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 TRIM43Q96BQ3 446 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-213ENST00000454468 GPATCH1Q9BRR8 931 aaKnown RBP11.63□□□□□ -0.55
SMPD4-213ENST00000454468 RERGLQ9H628 205 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 MIEF1Q9NQG6 463 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 IFT80Q9P2H3 777 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-213ENST00000454468 DNMT3BQ9UBC3 853 aaKnown RBP11.63□□□□□ -0.55
SMPD4-213ENST00000454468 TMCO1Q9UM00 188 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 H3BNH8 94 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 WISP3O95389 354 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-213ENST00000454468 PSMB9P28065 219 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 MAT2AP31153 395 aaKnown RBP11.63□□□□□ -0.55
SMPD4-213ENST00000454468 GJA8P48165 433 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 ARSFP54793 590 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 DOC2AQ14183 400 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 HACD2Q6Y1H2 254 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 CHERPQ8IWX8 916 aaKnown RBP11.63□□□□□ -0.55
SMPD4-213ENST00000454468 MICU2Q8IYU8 434 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 GTF2H4Q92759 462 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 HERC2P3Q9BVR0 1158 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 C11orf49Q9H6J7 331 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 OLAHQ9NV23 265 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 IL36AQ9UHA7 158 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 DOCK4Q8N1I0 1966 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 MYLKQ15746 1914 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 H0Y858 1186 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 GAPDHSO14556 408 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-213ENST00000454468 XPNPEP2O43895 674 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 PCCBP05166 539 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 BMP2P12643 396 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 CDH1P12830 882 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 FMO3P31513 532 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 PRKAG1P54619 331 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 NKX3-2P78367 333 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 B4GALNT1Q00973 533 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms