RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 DCBLD1Q8N8Z6 715 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 STAG3L4Q8TBR4 150 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 MGARPQ8TDB4 240 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 FBXL8Q96CD0 374 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 ZDHHC12Q96GR4 267 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 OR2A14Q96R47 310 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 MAP3K3Q99759 626 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 EGFL8Q99944 293 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 DPYSL5Q9BPU6 564 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 ATG10Q9H0Y0 220 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 TMEM216Q9P0N5 145 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 PDP2Q9P2J9 529 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 SLC17A7Q9P2U7 560 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 RNF112Q9ULX5 631 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 TMCO1Q9UM00 188 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 ENTPD2Q9Y5L3 495 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 ZNF839A8K0R7 811 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 A8MU76 341 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 ISM1B1AKI9 464 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 SUPT3HB4E1H0 165 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 UBXN8O00124 270 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 AGRPO00253 132 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 MATN2O00339 956 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 BIRC5O15392 142 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 HYAL3O43820 417 aaPredicted RBP12.58□□□□□ -0.4
VPS33A-202ENST00000451053 SUPT3HO75486 399 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 DHRS4L1P0CG22 281 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 PRDX3P30048 256 aaKnown RBP12.58□□□□□ -0.4
VPS33A-202ENST00000451053 HSD17B2P37059 387 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 MDH1P40925 334 aaKnown RBP12.58□□□□□ -0.4
VPS33A-202ENST00000451053 ETV4P43268 484 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 INHBCP55103 352 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 ASPHQ12797 758 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 FOXC1Q12948 553 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 KIR2DS3Q14952 304 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 ISXQ2M1V0 245 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 PHF19Q5T6S3 580 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 SPESP1Q6UW49 350 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 PRSS42Q7Z5A4 293 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 TMPRSS12Q86WS5 348 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 TRIM42Q8IWZ5 723 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 FAM20CQ8IXL6 584 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 RCBTB1Q8NDN9 531 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 ARMC2Q8NEN0 867 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 MDM1Q8TC05 714 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 SMPDL3AQ92484 453 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 RHBDF1Q96CC6 855 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 CCDC126Q96EE4 140 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 TMEM74Q96NL1 305 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 DEPDC7Q96QD5 511 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 PAIP2Q9BPZ3 127 aaKnown RBP12.58□□□□□ -0.4
VPS33A-202ENST00000451053 ABCF3Q9NUQ8 709 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 CD274Q9NZQ7 290 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 XPR1Q9UBH6 696 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 EMCNQ9ULC0 261 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 CLCA2Q9UQC9 943 aa12.58□□□□□ -0.4
VPS33A-202ENST00000451053 UNC13CQ8NB66 2214 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 IGHV5-51A0A0C4DH38 117 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 TLCD2A6NGC4 264 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 TAPBPO15533 448 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 SMIM24O75264 130 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 RASSF9O75901 435 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 ANXA5P08758 320 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 MYL2P10916 166 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 NEFHP12036 1026 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 MTHFD2P13995 350 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 JUPP14923 745 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 CPA3P15088 417 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 PVRP15151 417 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 CDH3P22223 829 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 CCKBRP32239 447 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 SERPINB4P48594 390 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 PRKAA2P54646 552 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 WDR4P57081 412 aaKnown RBP12.57□□□□□ -0.4
VPS33A-202ENST00000451053 TBPL1P62380 186 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 YBX1P67809 324 aaKnown RBP12.57□□□□□ -0.4
VPS33A-202ENST00000451053 TARDBPQ13148 414 aaKnown RBP eCLIP12.57□□□□□ -0.4
VPS33A-202ENST00000451053 NAE1Q13564 534 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 C16orf72Q14CZ0 275 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 SLC5A12Q1EHB4 618 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 FBXO48Q5FWF7 155 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 CACHD1Q5VU97 1274 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 C16orf46Q6P387 395 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 TMPRSS7Q7RTY8 843 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 ARHGAP22Q7Z5H3 698 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 PDPRQ8NCN5 879 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 ATL1Q8WXF7 558 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 PYCR2Q96C36 320 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 MED8Q96G25 268 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 CD180Q99467 661 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 TMEM79Q9BSE2 394 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 ACAT2Q9BWD1 397 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 PITPNM3Q9BZ71 974 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 KLHL25Q9H0H3 589 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 CCDC177Q9NQR7 707 aaPredicted RBP12.57□□□□□ -0.4
VPS33A-202ENST00000451053 NUDT4Q9NZJ9 180 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 COPG2Q9UBF2 871 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 PTPRBP23467 1997 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 CFAP54Q96N23 3096 aa12.57□□□□□ -0.4
VPS33A-202ENST00000451053 SLC9B1P1A6NJY1 282 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms