RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 GOLGA8KD6RF30 607 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 GOLGA8TH3BQL2 631 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 GFYI3L273 518 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 PEX12O00623 359 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 TXNDC9O14530 226 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 NDC80O14777 642 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 DSCR3O14972 297 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 ZBTB14O43829 449 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 NIPSNAP2O75323 286 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 CCNDBP1O95273 360 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 ITGAXP20702 1163 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 HRH2P25021 359 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 CMPK1P30085 196 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 FOLR3P41439 243 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 SOX8P57073 446 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 NFKB2Q00653 900 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 ILF2Q12905 390 aaKnown RBP15.38■□□□□ 0.05
SGCE-208ENST00000450385 KLHL38Q2WGJ6 581 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 PTCHD3Q3KNS1 767 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 RNASEH2BQ5TBB1 312 aaKnown RBP15.38■□□□□ 0.05
SGCE-208ENST00000450385 MLIPQ5VWP3 458 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 FCRL6Q6DN72 434 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 PRMT9Q6P2P2 845 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 OVCH1Q7RTY7 1134 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 TTC29Q8NA56 475 aaPredicted RBP15.38■□□□□ 0.05
SGCE-208ENST00000450385 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.38■□□□□ 0.05
SGCE-208ENST00000450385 OR2L3Q8NG85 312 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 ASB11Q8WXH4 323 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 LRRC39Q96DD0 335 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 EBNA1BP2Q99848 306 aaKnown RBP15.38■□□□□ 0.05
SGCE-208ENST00000450385 SELENOSQ9BQE4 189 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 C20orf96Q9NUD7 363 aaPredicted RBP15.38■□□□□ 0.05
SGCE-208ENST00000450385 FBXO5Q9UKT4 447 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 NFS1Q9Y697 457 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 MAD1L1Q9Y6D9 718 aa15.38■□□□□ 0.05
SGCE-208ENST00000450385 MDC1Q14676 2089 aaKnown RBP15.37■□□□□ 0.05
SGCE-208ENST00000450385 DNALI1O14645 258 aaPredicted RBP15.37■□□□□ 0.05
SGCE-208ENST00000450385 DPM1O60762 260 aa15.37■□□□□ 0.05
SGCE-208ENST00000450385 IPO13O94829 963 aaKnown RBP15.37■□□□□ 0.05
SGCE-208ENST00000450385 PGAM1P18669 254 aa15.37■□□□□ 0.05
SGCE-208ENST00000450385 PTGIRP43119 386 aa15.37■□□□□ 0.05
SGCE-208ENST00000450385 CCL11P51671 97 aa15.37■□□□□ 0.05
SGCE-208ENST00000450385 ABATP80404 500 aa15.37■□□□□ 0.05
SGCE-208ENST00000450385 FOXK1P85037 733 aa15.37■□□□□ 0.05
SGCE-208ENST00000450385 MORF4L2Q15014 288 aa15.37■□□□□ 0.05
SGCE-208ENST00000450385 CNSTQ6PJW8 725 aa15.37■□□□□ 0.05
SGCE-208ENST00000450385 CLEC1AQ8NC01 280 aa15.37■□□□□ 0.05
SGCE-208ENST00000450385 RNF31Q96EP0 1072 aa15.37■□□□□ 0.05
SGCE-208ENST00000450385 MVB12AQ96EY5 273 aa15.37■□□□□ 0.05
SGCE-208ENST00000450385 IL17FQ96PD4 163 aa15.37■□□□□ 0.05
SGCE-208ENST00000450385 SMAD5Q99717 465 aaKnown RBP15.37■□□□□ 0.05
SGCE-208ENST00000450385 EPN3Q9H201 632 aa15.37■□□□□ 0.05
SGCE-208ENST00000450385 PRRC2CQ9Y520 2896 aaKnown RBP15.37■□□□□ 0.05
SGCE-208ENST00000450385 RP1L1Q8IWN7 2480 aaPredicted RBP15.36■□□□□ 0.05
SGCE-208ENST00000450385 A0A1W2PPV9 198 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 OR2A25A4D2G3 310 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 ARGFXA6NJG6 315 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 GOLGA8MH3BSY2 632 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 PCDH17O14917 1159 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 HCRTR1O43613 425 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 VPS26AO75436 327 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 ALAS2P22557 587 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 CD97P48960 835 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 PRDX1Q06830 199 aaKnown RBP15.36■□□□□ 0.05
SGCE-208ENST00000450385 CTBP1Q13363 440 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 DEFB110Q30KQ9 67 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 ACSBG2Q5FVE4 666 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 SPANXN3Q5MJ09 141 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 RNF44Q7L0R7 432 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 ZFYVE21Q9BQ24 234 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 TRIM55Q9BYV6 548 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 PCBD2Q9H0N5 130 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 CUTCQ9NTM9 273 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 TAS2R13Q9NYV9 303 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 DHCR7Q9UBM7 475 aaKnown RBP15.36■□□□□ 0.05
SGCE-208ENST00000450385 ASIC3Q9UHC3 531 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 CORO1CQ9ULV4 474 aaPredicted RBP15.36■□□□□ 0.05
SGCE-208ENST00000450385 CDC14AQ9UNH5 594 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 PTRH2Q9Y3E5 179 aaKnown RBP15.36■□□□□ 0.05
SGCE-208ENST00000450385 NBASA2RRP1 2371 aa15.36■□□□□ 0.05
SGCE-208ENST00000450385 ARHGEF33A8MVX0 844 aa15.35■□□□□ 0.05
SGCE-208ENST00000450385 CCDC188H7C350 402 aa15.35■□□□□ 0.05
SGCE-208ENST00000450385 PRPF4O43172 522 aaKnown RBP eCLIP15.35■□□□□ 0.052e-6■■■■□ 25.8
SGCE-208ENST00000450385 ALPPP05187 535 aa15.35■□□□□ 0.05
SGCE-208ENST00000450385 MMP11P24347 488 aa15.35■□□□□ 0.05
SGCE-208ENST00000450385 RPA3P35244 121 aaPredicted RBP15.35■□□□□ 0.05
SGCE-208ENST00000450385 SLC1A2P43004 574 aa15.35■□□□□ 0.05
SGCE-208ENST00000450385 RGS4P49798 205 aa15.35■□□□□ 0.05
SGCE-208ENST00000450385 PNLIPRP1P54315 467 aa15.35■□□□□ 0.05
SGCE-208ENST00000450385 FRG1Q14331 258 aaKnown RBP15.35■□□□□ 0.05
SGCE-208ENST00000450385 HSP90AA5PQ58FG0 334 aa15.35■□□□□ 0.05
SGCE-208ENST00000450385 WASHC2DQ5SRD0 308 aa15.35■□□□□ 0.05
SGCE-208ENST00000450385 GARNL3Q5VVW2 1013 aa15.35■□□□□ 0.05
SGCE-208ENST00000450385 CYHR1Q6ZMK1 362 aa15.35■□□□□ 0.05
SGCE-208ENST00000450385 TTLL10Q6ZVT0 673 aa15.35■□□□□ 0.05
SGCE-208ENST00000450385 KCNMB4Q86W47 210 aa15.35■□□□□ 0.05
SGCE-208ENST00000450385 DENND6AQ8IWF6 608 aa15.35■□□□□ 0.05
SGCE-208ENST00000450385 CNTN4Q8IWV2 1026 aa15.35■□□□□ 0.05
SGCE-208ENST00000450385 PDIK1LQ8N165 341 aa15.35■□□□□ 0.05
SGCE-208ENST00000450385 C2orf73Q8N5S3 287 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms