RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 TOR1AIP2Q8NFQ8 470 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 AP2M1Q96CW1 435 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 FBXL18Q96ME1 805 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 TMEM246Q9BRR3 403 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 SLC29A3Q9BZD2 475 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 TRIM2Q9C040 744 aa13.62□□□□□ -0.23
ITGB4-202ENST00000449880 ARPC4-TTLL3A0A0A6YYG9 625 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 DCLK1O15075 740 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 HMGN1P05114 100 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 ITGB1P05556 798 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 PBX3P40426 434 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 PARGQ86W56 976 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 C17orf64Q86WR6 236 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 DEFB118Q96PH6 123 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 TBC1D17Q9HA65 648 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 TCAF2A6NFQ2 919 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 M0R233 179 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 FLT3LGP49771 235 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 OR52E8Q6IFG1 317 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 FAM171BQ6P995 826 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 INO80EQ8NBZ0 244 aaPredicted RBP13.61□□□□□ -0.23
ITGB4-202ENST00000449880 OR4K2Q8NGD2 314 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 SNX33Q8WV41 574 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 RHBDF1Q96CC6 855 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 MGAT4AQ9UM21 535 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 MAU2Q9Y6X3 613 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 TCRBV7S3A2A0A539 114 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 SCN2BO60939 215 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 GOT2P00505 430 aaKnown RBP13.61□□□□□ -0.23
ITGB4-202ENST00000449880 HNRNPDQ14103 355 aaKnown RBP13.61□□□□□ -0.23
ITGB4-202ENST00000449880 BAIAP2L2Q6UXY1 529 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 KIF18BQ86Y91 864 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 OR52J3Q8NH60 311 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 BRSK1Q8TDC3 778 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 EXOC2Q96KP1 924 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 GAS2L1Q99501 681 aaPredicted RBP13.61□□□□□ -0.23
ITGB4-202ENST00000449880 TMEM27Q9HBJ8 222 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 PAK1IP1Q9NWT1 392 aaPredicted RBP13.61□□□□□ -0.23
ITGB4-202ENST00000449880 MCIDASD6RGH6 385 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 OR7A10O76100 309 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 NFATC1O95644 943 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 STT3AP46977 705 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 ABHD18Q0P651 414 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 MEP1AQ16819 746 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 SLC10A6Q3KNW5 377 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 COQ5Q5HYK3 327 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 JAZF1Q86VZ6 243 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 TMC8Q8IU68 726 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 TMEM80Q96HE8 168 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 MIPEPQ99797 713 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 RABL2AQ9UBK7 228 aaPredicted RBP13.61□□□□□ -0.23
ITGB4-202ENST00000449880 EIF2B4Q9UI10 523 aaKnown RBP13.61□□□□□ -0.23
ITGB4-202ENST00000449880 RABL2BQ9UNT1 228 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 FKBP7Q9Y680 259 aa13.61□□□□□ -0.23
ITGB4-202ENST00000449880 BHMG1C9JSJ3 638 aaPredicted RBP13.6□□□□□ -0.23
ITGB4-202ENST00000449880 DLX3O60479 287 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 ZNF432O94892 652 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 RPS3P23396 243 aaKnown RBP eCLIP13.6□□□□□ -0.23
ITGB4-202ENST00000449880 BRCC3P46736 316 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 XKP51811 444 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 TAF1AQ15573 450 aaPredicted RBP13.6□□□□□ -0.23
ITGB4-202ENST00000449880 C6orf141Q5SZD1 244 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 SDHAF4Q5VUM1 108 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 MED27Q6P2C8 311 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 CYS1Q717R9 158 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 LGI4Q8N135 537 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 CHCHD4Q8N4Q1 142 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 OR8J3Q8NGG0 315 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 DNAJA4Q8WW22 397 aaPredicted RBP13.6□□□□□ -0.23
ITGB4-202ENST00000449880 AIF1LQ9BQI0 150 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 ANKRD60Q9BZ19 345 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 GLYATL1P3A0A0U1RQE8 302 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 SELPP16109 830 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 IL7RP16871 459 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 HTR1EP28566 365 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 NFATC3Q12968 1075 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 RAVER1Q8IY67 606 aaKnown RBP13.6□□□□□ -0.23
ITGB4-202ENST00000449880 CLIP4Q8N3C7 705 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 CFAP97Q9P2B7 532 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 COL18A1P39060 1754 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 AGRPO00253 132 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 SPAM1P38567 509 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 RPL19P84098 196 aaKnown RBP13.6□□□□□ -0.23
ITGB4-202ENST00000449880 SLC39A4Q6P5W5 647 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 SLC24A5Q71RS6 500 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 COMMD4Q9H0A8 199 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 CST11Q9H112 138 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 POLR2J3Q9H1A7 115 aaKnown RBP13.6□□□□□ -0.23
ITGB4-202ENST00000449880 POPDC3Q9HBV1 291 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 ZNF451Q9Y4E5 1061 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 NT5C1B-RDH14C9J2C7 533 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 NEDD8-MDP1E9PL57 170 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 PIRTP0C851 137 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 EPCAMP16422 314 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 PIGGQ5H8A4 983 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 PLPP4Q5VZY2 271 aa13.6□□□□□ -0.23
ITGB4-202ENST00000449880 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.6□□□□□ -0.23
ITGB4-202ENST00000449880 SRFBP1Q8NEF9 429 aaKnown RBP13.6□□□□□ -0.23
ITGB4-202ENST00000449880 CNDP2Q96KP4 475 aaKnown RBP13.6□□□□□ -0.23
ITGB4-202ENST00000449880 ELL3Q9HB65 397 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms