RNA–Protein interactions for RNA: ENST00000448526.6

CDKN1A-204, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDKN1A, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-204ENST00000448526 FBXO46Q6PJ61 603 aaPredicted RBP16.59■□□□□ 0.25
CDKN1A-204ENST00000448526 THOC6Q86W42 341 aaKnown RBP16.59■□□□□ 0.25
CDKN1A-204ENST00000448526 CALHM3Q86XJ0 350 aa16.59■□□□□ 0.25
CDKN1A-204ENST00000448526 OFCC1Q8IZS5 231 aa16.59■□□□□ 0.25
CDKN1A-204ENST00000448526 LEMD2Q8NC56 503 aa16.59■□□□□ 0.25
CDKN1A-204ENST00000448526 VN1R2Q8NFZ6 395 aa16.59■□□□□ 0.25
CDKN1A-204ENST00000448526 TMBIM1Q969X1 311 aa16.59■□□□□ 0.25
CDKN1A-204ENST00000448526 AP2M1Q96CW1 435 aa16.59■□□□□ 0.25
CDKN1A-204ENST00000448526 VPS35Q96QK1 796 aa16.59■□□□□ 0.25
CDKN1A-204ENST00000448526 OR4K3Q96R72 315 aa16.59■□□□□ 0.25
CDKN1A-204ENST00000448526 KCNH6Q9H252 994 aa16.59■□□□□ 0.25
CDKN1A-204ENST00000448526 CLK4Q9HAZ1 481 aaKnown RBP16.59■□□□□ 0.25
CDKN1A-204ENST00000448526 SMPD3Q9NY59 655 aaPredicted RBP16.59■□□□□ 0.25
CDKN1A-204ENST00000448526 LIMD1Q9UGP4 676 aa16.59■□□□□ 0.25
CDKN1A-204ENST00000448526 FADS3Q9Y5Q0 445 aa16.59■□□□□ 0.25
CDKN1A-204ENST00000448526 A0A096LPI6 279 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 SLC5A10A0PJK1 596 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 SERTM1A2A2V5 107 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 CXCR6O00574 342 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 NPC1O15118 1278 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 ERN1O75460 977 aaKnown RBP16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 SEC24DO94855 1032 aaPredicted RBP16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 SRPRAP08240 638 aaKnown RBP16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 VIPR2P41587 438 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 ALDH3B2P48448 385 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 PRLHRP49683 370 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 IRF8Q02556 426 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 CHRNB3Q05901 458 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 FPGSQ05932 587 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 NAE1Q13564 534 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 SF1Q15637 639 aaKnown RBP16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 LDLRAP1Q5SW96 308 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 OTUD3Q5T2D3 398 aaPredicted RBP16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 ZNF551Q7Z340 670 aaPredicted RBP16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 MICU2Q8IYU8 434 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 AADATQ8N5Z0 425 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 ST13P5Q8NFI4 369 aaPredicted RBP16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 FCRL1Q96LA6 429 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 C8orf4Q9NR00 106 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 WBP1LQ9NX94 342 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 STOX2Q9P2F5 926 aaPredicted RBP16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 GULP1Q9UBP9 304 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 SLC8A2Q9UPR5 921 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 MRPS23Q9Y3D9 190 aaKnown RBP16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 PCDHGA11Q9Y5H2 935 aa16.58■□□□□ 0.25
CDKN1A-204ENST00000448526 PRRT4C9JH25 899 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 H3BSA7 217 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 KPNA3O00505 521 aaPredicted RBP16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 SLC9A3R1O14745 358 aaPredicted RBP16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 PBLDP30039 288 aaPredicted RBP16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 CAPGP40121 348 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 SLC14A1Q13336 389 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 LSAMPQ13449 338 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 DOC2AQ14183 400 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 SYTL3Q4VX76 610 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 XKR6Q5GH73 641 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 ATG9BQ674R7 924 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 OR4F3Q6IEY1 312 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 ADNP2Q6IQ32 1131 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 TMEM220Q6QAJ8 160 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 AGTRAPQ6RW13 159 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 HOMEZQ8IX15 550 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 ZNF786Q8N393 782 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 DHRSXQ8N5I4 330 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 TRIML2Q8N7C3 387 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 WDR20Q8TBZ3 569 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 HM13Q8TCT9 377 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 TMEM159Q96B96 161 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 TESCQ96BS2 214 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 SH3GL1Q99961 368 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 HAUS8Q9BT25 410 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 RAD18Q9NS91 495 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 CEPT1Q9Y6K0 416 aa16.58■□□□□ 0.24
CDKN1A-204ENST00000448526 CCDC160A6NGH7 325 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 ATG13O75143 517 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 GMNNO75496 209 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 SOD1P00441 154 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 HLA-EP13747 358 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 MYOGP15173 224 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 MAP4P27816 1152 aaKnown RBP16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 MTHFRP42898 656 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 SLC6A11P48066 632 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 VASPP50552 380 aaPredicted RBP16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 IST1P53990 364 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 ADARB1P78563 741 aaKnown RBP16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 ADRM1Q16186 407 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 LIPJQ5W064 366 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 TTC33Q6PID6 262 aaPredicted RBP16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 RBM23Q86U06 439 aaKnown RBP16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 TRIM74Q86UV6 250 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 C12orf76Q8N812 135 aaPredicted RBP16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 GLMNQ92990 594 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 MED8Q96G25 268 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 ITCHQ96J02 903 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 LRIG1Q96JA1 1093 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 ZFYVE19Q96K21 471 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 MTERF1Q99551 399 aaKnown RBP16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 CCM2Q9BSQ5 444 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 DMTF1Q9Y222 760 aa16.57■□□□□ 0.24
CDKN1A-204ENST00000448526 TMED5Q9Y3A6 229 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms