RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 PDLIM3Q53GG5 364 aaPredicted RBP3.73□□□□□ -1.81
AC003001.1-201ENST00000443247 GARNL3Q5VVW2 1013 aa3.73□□□□□ -1.81
AC003001.1-201ENST00000443247 METTL7BQ6UX53 244 aa3.73□□□□□ -1.81
AC003001.1-201ENST00000443247 CAMKMTQ7Z624 323 aa3.73□□□□□ -1.81
AC003001.1-201ENST00000443247 THAP8Q8NA92 274 aa3.73□□□□□ -1.81
AC003001.1-201ENST00000443247 ZNRF4Q8WWF5 429 aa3.73□□□□□ -1.81
AC003001.1-201ENST00000443247 PIGBQ92521 554 aa3.73□□□□□ -1.81
AC003001.1-201ENST00000443247 THAP2Q9H0W7 228 aa3.73□□□□□ -1.81
AC003001.1-201ENST00000443247 NESP48681 1621 aa3.73□□□□□ -1.81
AC003001.1-201ENST00000443247 NCAPD3P42695 1498 aa3.73□□□□□ -1.81
AC003001.1-201ENST00000443247 PRDM2Q13029 1718 aa3.73□□□□□ -1.81
AC003001.1-201ENST00000443247 A0A1W2PPM1 405 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 EPHB6O15197 1021 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 MAGEC1O60732 1142 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 GLRA3O75311 464 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 ERAL1O75616 437 aaKnown RBP3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 RAB40ALP0C0E4 278 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 TRIM49P0CI25 452 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 TRIM49CP0CI26 452 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 CCR10P46092 362 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 KRT71Q3SY84 523 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 FASTKD1Q53R41 847 aaKnown RBP3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 SLC35D3Q5M8T2 416 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 LCN1P1Q5VSP4 162 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 PRR27Q6MZM9 219 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 DOK6Q6PKX4 331 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 SLC25A47Q6Q0C1 308 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 FAM198BQ6UWH4 519 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 Q6ZRP5 223 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 G2E3Q7L622 706 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 BMPERQ8N8U9 685 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 AVL9Q8NBF6 648 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 ZNF486Q96H40 463 aaPredicted RBP3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 C10orf90Q96M02 699 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 NSMCE3Q96MG7 304 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 USP28Q96RU2 1077 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 EGFL8Q99944 293 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 NOL11Q9H8H0 719 aaKnown RBP3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 SPHK2Q9NRA0 654 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 MAN2C1Q9NTJ4 1040 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 OLAHQ9NV23 265 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 IL17BQ9UHF5 180 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 RNF150Q9ULK6 438 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 TRPV2Q9Y5S1 764 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 FAM169AQ9Y6X4 670 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 SMARCA4P51532 1647 aa3.72□□□□□ -1.81
AC003001.1-201ENST00000443247 C15orf61A6NNL5 157 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 E9PQ18 207 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 TRIM77I1YAP6 450 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 ARPC2O15144 300 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 CDK2AP2O75956 126 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 SEC24AO95486 1093 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 LHCGRP22888 699 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 LMO4P61968 165 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 LETM2Q2VYF4 491 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 MCMDC2Q4G0Z9 681 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 WLSQ5T9L3 541 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 UGT3A1Q6NUS8 523 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 CFAP161Q6P656 301 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 ENOSF1Q7L5Y1 443 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 LRRTM1Q86UE6 522 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 LGI2Q8N0V4 545 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 TC2NQ8N9U0 490 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 OR1L3Q8NH93 324 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 ZNF519Q8TB69 540 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 ATL1Q8WXF7 558 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 CENPTQ96BT3 561 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 NECTIN4Q96NY8 510 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 KRT12Q99456 494 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 PKP2Q99959 881 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 PIGQQ9BRB3 760 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 NUDT16L1Q9BRJ7 211 aaKnown RBP3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 PYGO2Q9BRQ0 406 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 PANK2Q9BZ23 570 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 CNOT10Q9H9A5 744 aaKnown RBP3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 TRPV4Q9HBA0 871 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 ANAPC2Q9UJX6 822 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 RPS6KL1Q9Y6S9 549 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 MRC2Q9UBG0 1479 aa3.71□□□□□ -1.82
AC003001.1-201ENST00000443247 A0A1W2PPQ1 181 aa3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 ZSCAN5DPP0CG00 497 aa3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 NR2F1P10589 423 aa3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 SLC2A2P11168 524 aaPredicted RBP3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 CYP2A7P20853 494 aa3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 ZNF10P21506 573 aaPredicted RBP3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 PTGER4P35408 488 aa3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 CCR3P51677 355 aa3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 IFI35P80217 286 aaPredicted RBP3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 ENPP2Q13822 863 aa3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 SNTB1Q13884 538 aaKnown RBP3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 NECTIN1Q15223 517 aa3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 PHKG1Q16816 387 aa3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 BRINP3Q76B58 766 aa3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 OR6S1Q8NH40 331 aa3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 SLCO2A1Q92959 643 aa3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 SECISBP2LQ93073 1101 aaKnown RBP3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 MOB3AQ96BX8 217 aa3.7□□□□□ -1.82
AC003001.1-201ENST00000443247 GPR88Q9GZN0 384 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms