RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 HERC3Q15034 1050 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 FAM133BQ5BKY9 247 aaKnown RBP4.38□□□□□ -1.71
PFDN4-202ENST00000441080 XKR3Q5GH77 459 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 SLC35D3Q5M8T2 416 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 ZNF790Q6PG37 636 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 CCAR2Q8N163 923 aaKnown RBP4.38□□□□□ -1.71
PFDN4-202ENST00000441080 NDUFAF2Q8N183 169 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 ANKRD13CQ8N6S4 541 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 OR2T11Q8NH01 316 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 PROX1Q92786 737 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 ZMAT2Q96NC0 199 aaKnown RBP4.38□□□□□ -1.71
PFDN4-202ENST00000441080 LITAFQ99732 161 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 SLC2A11Q9BYW1 496 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 ZNF71Q9NQZ8 489 aaPredicted RBP4.38□□□□□ -1.71
PFDN4-202ENST00000441080 TXNDC16Q9P2K2 825 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 POLLQ9UGP5 575 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 GRID1Q9ULK0 1009 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 TNNQ9UQP3 1299 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 KIAA1210Q9ULL0 1709 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 IGHV4-4A0A075B6R2 117 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 CCDC188H7C350 402 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 EIF5BO60841 1220 aaKnown RBP4.37□□□□□ -1.71
PFDN4-202ENST00000441080 RPS6KA5O75582 802 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 GPIP06744 558 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 MYL6BP14649 208 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 DARSP14868 501 aaKnown RBP4.37□□□□□ -1.71
PFDN4-202ENST00000441080 CDC25CP30307 473 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 CRIP2P52943 208 aaPredicted RBP4.37□□□□□ -1.71
PFDN4-202ENST00000441080 DLK1P80370 383 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 GCNT1Q02742 428 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 TMEM30BQ3MIR4 351 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 SLC25A53Q5H9E4 307 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 SUSD1Q6UWL2 747 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 THNSL1Q8IYQ7 743 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 KIRREL3Q8IZU9 778 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 MARVELD2Q8N4S9 558 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 RASGEF1AQ8N9B8 481 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 TMEM178AQ8NBL3 297 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 OR10Q1Q8NGQ4 319 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 KCNE4Q8WWG9 221 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 DYRK2Q92630 601 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 GBP5Q96PP8 586 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 SPAG5Q96R06 1193 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 MGME1Q9BQP7 344 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 KATNB1Q9BVA0 655 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 RBM4Q9BWF3 364 aaKnown RBP4.37□□□□□ -1.71
PFDN4-202ENST00000441080 GTPBP2Q9BX10 602 aaKnown RBP4.37□□□□□ -1.71
PFDN4-202ENST00000441080 EDEM3Q9BZQ6 932 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 ZMYND12Q9H0C1 365 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 SHARPINQ9H0F6 387 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 FN3KQ9H479 309 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 TLE6Q9H808 572 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 DNAJC4Q9NNZ3 241 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 CHST11Q9NPF2 352 aa4.37□□□□□ -1.71
PFDN4-202ENST00000441080 CASTOR2A6NHX0 329 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 ANXA2P2A6NMY6 339 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 PSMD14O00487 310 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 ZG16O60844 167 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 TBCAO75347 108 aaKnown RBP4.36□□□□□ -1.71
PFDN4-202ENST00000441080 DDHD2O94830 711 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 AP2A2O94973 939 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 HSPA4LO95757 839 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 PAK4O96013 591 aaPredicted RBP4.36□□□□□ -1.71
PFDN4-202ENST00000441080 GSRP00390 522 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 FAM157CP0CG43 387 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 ACAT1P24752 427 aaKnown RBP4.36□□□□□ -1.71
PFDN4-202ENST00000441080 VAMP7P51809 220 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 TFCP2Q12800 502 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 PDLIM3Q53GG5 364 aaPredicted RBP4.36□□□□□ -1.71
PFDN4-202ENST00000441080 LCN1P1Q5VSP4 162 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 OR4A47Q6IF82 309 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 IL27RAQ6UWB1 636 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 ENPP7Q6UWV6 458 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 C11orf57Q6ZUT1 292 aaPredicted RBP4.36□□□□□ -1.71
PFDN4-202ENST00000441080 VSIG1Q86XK7 387 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 NIPA2Q8N8Q9 360 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 DDHD1Q8NEL9 900 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 PRAC1Q96KF2 57 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 SPATA33Q96N06 139 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 CCDC3Q9BQI4 270 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 PITPNM3Q9BZ71 974 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 BARHL1Q9BZE3 327 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 PPANQ9NQ55 473 aaKnown RBP4.36□□□□□ -1.71
PFDN4-202ENST00000441080 GSN-AS1Q9NRJ2 163 aa4.36□□□□□ -1.71
PFDN4-202ENST00000441080 A0A087WW49 117 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 TRAV24A0A0B4J272 114 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 ARHGEF37A1IGU5 675 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 SLCO1B7G3V0H7 640 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 O00370 1275 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 SNX3O60493 162 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 ATP6AP2O75787 350 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 PSMA3P25788 255 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 CD27P26842 260 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 HSD17B3P37058 310 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 ATP12AP54707 1039 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 CLDN15P56746 228 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 SP3Q02447 781 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 ITGA9Q13797 1035 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 TEAD2Q15562 447 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms