RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 GABRA4P48169 554 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 PMS2P54278 862 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 ATP6V0D1P61421 351 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 ABATP80404 500 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 TLE3Q04726 772 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 PRDX1Q06830 199 aaKnown RBP11.37□□□□□ -0.59
HSPG2-206ENST00000439717 PHKG1Q16816 387 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 ZC3H12BQ5HYM0 836 aaKnown RBP11.37□□□□□ -0.59
HSPG2-206ENST00000439717 UBAP2Q5T6F2 1119 aaKnown RBP11.37□□□□□ -0.59
HSPG2-206ENST00000439717 PWWP2BQ6NUJ5 590 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 FIGLAQ6QHK4 219 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 SUSD1Q6UWL2 747 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 SBSNQ6UWP8 590 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 ADAMTSL2Q86TH1 951 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 FAM20CQ8IXL6 584 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 NLGN4XQ8N0W4 816 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 CNPY4Q8N129 248 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 DNAJC22Q8N4W6 341 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 ESX1Q8N693 406 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 NLGN4YQ8NFZ3 816 aaPredicted RBP11.37□□□□□ -0.59
HSPG2-206ENST00000439717 SLC44A1Q8WWI5 657 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 N4BP2L2Q92802 583 aaPredicted RBP11.37□□□□□ -0.59
HSPG2-206ENST00000439717 NKD1Q969G9 470 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 UBXN10Q96LJ8 280 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 MIPEPQ99797 713 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 TXLNGYQ9BZA5 131 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 FAM60AQ9NP50 221 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 MRPS30Q9NP92 439 aaKnown RBP11.37□□□□□ -0.59
HSPG2-206ENST00000439717 CCDC177Q9NQR7 707 aaPredicted RBP11.37□□□□□ -0.59
HSPG2-206ENST00000439717 ARL15Q9NXU5 204 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 UTP6Q9NYH9 597 aaKnown RBP11.37□□□□□ -0.59
HSPG2-206ENST00000439717 CTNNAL1Q9UBT7 734 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 PLCL2Q9UPR0 1127 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 PCDHB3Q9Y5E6 796 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 IKBKGQ9Y6K9 419 aa11.37□□□□□ -0.59
HSPG2-206ENST00000439717 NPEPPSL1A6NEC2 478 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 TMEM150CB9EJG8 249 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 CDC7O00311 574 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 PHGDHO43175 533 aaKnown RBP11.36□□□□□ -0.59
HSPG2-206ENST00000439717 RIPK2O43353 540 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 CPNE3O75131 537 aaKnown RBP11.36□□□□□ -0.59
HSPG2-206ENST00000439717 SCRG1O75711 98 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 KIAA0754O94854 1291 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 FAM153BP0C7A2 387 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 ZNF28P17035 718 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 HRH2P25021 359 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 CNTFP26441 200 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 PSMB5P28074 263 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 MSH2P43246 934 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 SERPINB9P50453 376 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 ITGA1P56199 1179 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 TBPL1P62380 186 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 CDKL1Q00532 357 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 ABHD18Q0P651 414 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 TSTA3Q13630 321 aaPredicted RBP11.36□□□□□ -0.59
HSPG2-206ENST00000439717 TGIF1Q15583 401 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 UAP1Q16222 522 aaPredicted RBP11.36□□□□□ -0.59
HSPG2-206ENST00000439717 PPP1R3AQ16821 1122 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 FAM153CQ494X1 144 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 MANEAQ5SRI9 462 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 ICE2Q659A1 982 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 FCRL6Q6DN72 434 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 AGTRAPQ6RW13 159 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 C6orf15Q6UXA7 325 aaPredicted RBP11.36□□□□□ -0.59
HSPG2-206ENST00000439717 RAPH1Q70E73 1250 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 TAOK1Q7L7X3 1001 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 TIPARPQ7Z3E1 657 aaKnown RBP11.36□□□□□ -0.59
HSPG2-206ENST00000439717 TMEM126BQ8IUX1 230 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 GPR135Q8IZ08 494 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 CACNA2D3Q8IZS8 1091 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 PPFIBP2Q8ND30 876 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 OR1L3Q8NH93 324 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 FBXL8Q96CD0 374 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 MRRFQ96E11 262 aaKnown RBP11.36□□□□□ -0.59
HSPG2-206ENST00000439717 LRFN5Q96NI6 719 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 CCNL2Q96S94 520 aaPredicted RBP11.36□□□□□ -0.59
HSPG2-206ENST00000439717 ANKZF1Q9H8Y5 726 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 ENAMQ9NRM1 1142 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 TAC3Q9UHF0 121 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 ZNF180Q9UJW8 692 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 IKZF3Q9UKT9 509 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 OARD1Q9Y530 152 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 AP1M2Q9Y6Q5 423 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 APC2O95996 2303 aa11.36□□□□□ -0.59
HSPG2-206ENST00000439717 A0A087X1B8 175 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 CCDC189A1A4V9 331 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 HMX2A2RU54 273 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 OR2A25A4D2G3 310 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 E7EQ34 232 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 OR2B3O76000 313 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 KRT38O76015 456 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 TIAF1O95411 115 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 ANXA5P08758 320 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 HBQ1P09105 142 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 CCNYL3P0C7X3 344 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 SLC35E2BP0CK96 405 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 CD1DP15813 335 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 ITPKBP27987 946 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 HNMTP50135 292 aa11.35□□□□□ -0.59
HSPG2-206ENST00000439717 SERPINB8P50452 374 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms