RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 ZNF516Q92618 1163 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 TRMOQ9BU70 441 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 MEAF6Q9HAF1 191 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 BRF2Q9HAW0 419 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 SERINC1Q9NRX5 453 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 PLCL2Q9UPR0 1127 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 COMMD3-BMI1R4GMX3 469 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 IRGMA1A4Y4 181 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 TTC34A8MYJ7 566 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 PRH1P02810 166 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 PSMA1P25786 263 aaKnown RBP10.11□□□□□ -0.79
SHPRH-206ENST00000438092 ARHGAP1Q07960 439 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 FBXL22Q6P050 247 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 BPIFB1Q8TDL5 484 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 PKP4Q99569 1192 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 TDP1Q9NUW8 608 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 MYH6P13533 1939 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 BLOC1S5-TXNDC5H3BN57 136 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 POP7O75817 140 aaKnown RBP10.11□□□□□ -0.79
SHPRH-206ENST00000438092 OAZ2O95190 189 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 KLF8O95600 359 aaPredicted RBP10.11□□□□□ -0.79
SHPRH-206ENST00000438092 MAP3K8P41279 467 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 OR12D2P58182 307 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 MSL3Q8N5Y2 521 aaKnown RBP10.11□□□□□ -0.79
SHPRH-206ENST00000438092 TMEM203Q969S6 136 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 MINDY3Q9H8M7 445 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 MKKSQ9NPJ1 570 aaPredicted RBP10.11□□□□□ -0.79
SHPRH-206ENST00000438092 DKKL1Q9UK85 242 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 DAPL1A0PJW8 107 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 K7EPI3 171 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 ATP5A1P25705 553 aaKnown RBP10.11□□□□□ -0.79
SHPRH-206ENST00000438092 SDC2P34741 201 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 SLC11A1P49279 550 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 KLHL26Q53HC5 615 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 ADGRF1Q5T601 910 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 LRRC66Q68CR7 880 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 SYVN1Q86TM6 617 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 CLDN19Q8N6F1 224 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 ZNF527Q8NB42 609 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 CCDC120Q96HB5 630 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 ADAD1Q96M93 576 aaKnown RBP10.11□□□□□ -0.79
SHPRH-206ENST00000438092 PRICKLE1Q96MT3 831 aaPredicted RBP10.11□□□□□ -0.79
SHPRH-206ENST00000438092 GPN1Q9HCN4 374 aaPredicted RBP10.11□□□□□ -0.79
SHPRH-206ENST00000438092 SNTG1Q9NSN8 517 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 SALL4Q9UJQ4 1053 aa10.11□□□□□ -0.79
SHPRH-206ENST00000438092 IGLV3-22A0A075B6J6 115 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 SMIM30A4D0T7 59 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 KMOO15229 486 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 MID1O15344 667 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 HEXBP07686 556 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 ECHS1P30084 290 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 ACSL1P33121 698 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 NR1H2P55055 460 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 RGMAQ96B86 450 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 CITED4Q96RK1 184 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 PIGVQ9NUD9 493 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 COMMD3Q9UBI1 195 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 SRRDQ9UH36 339 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 GON4LQ3T8J9 2241 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 ROBO3Q96MS0 1386 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 CDC40O60508 579 aaKnown RBP eCLIP10.1□□□□□ -0.79
SHPRH-206ENST00000438092 ATP1B2P14415 290 aaPredicted RBP10.1□□□□□ -0.79
SHPRH-206ENST00000438092 LBX1P52954 281 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 MLLT10P55197 1068 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 VBP1P61758 197 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 RPL6Q02878 288 aaKnown RBP10.1□□□□□ -0.79
SHPRH-206ENST00000438092 ARFRP1Q13795 201 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 SEMA3AQ14563 771 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 ZNF311Q5JNZ3 666 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 C1orf216Q8TAB5 229 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 HAS3O00219 553 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 ESR1P03372 595 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 NUDT17P0C025 328 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 PREPP48147 710 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 INAVAQ3KP66 663 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 IFI44LQ53G44 452 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 EZH1Q92800 747 aaPredicted RBP10.1□□□□□ -0.79
SHPRH-206ENST00000438092 TNFRSF25Q93038 417 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 CCM2Q9BSQ5 444 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 ADAMTS3O15072 1205 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 MUSKO15146 869 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 RASGEF1BQ0VAM2 473 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 HNRNPDQ14103 355 aaKnown RBP10.1□□□□□ -0.79
SHPRH-206ENST00000438092 OR2L8Q8NGY9 312 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 SLC22A17Q8WUG5 538 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 TMEM125Q96AQ2 219 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 PCDHAC1Q9H158 963 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 TXNRD2Q9NNW7 524 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 ZDHHC3Q9NYG2 299 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 FTSJ1Q9UET6 329 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 ZNF878C9JN71 531 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 SLC3A1Q07837 685 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 FUT2Q10981 343 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 RAB30Q15771 203 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 ABCA11PQ4W5N1 156 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 CARD17Q5XLA6 110 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 TRPV1Q8NER1 839 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 KLHL6Q8WZ60 621 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 IL4I1Q96RQ9 567 aa10.1□□□□□ -0.79
SHPRH-206ENST00000438092 FZD3Q9NPG1 666 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms