RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 MMD2Q8IY49 270 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 SYCP3Q8IZU3 236 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 APCDD1Q8J025 514 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 MAPKAPK5-AS1Q8N8E1 139 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 GPATCH11Q8N954 259 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 OR11H4Q8NGC9 324 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 ZNF473Q8WTR7 871 aaKnown RBP2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 SEPT1Q8WYJ6 367 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 PIGBQ92521 554 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 TEKT1Q969V4 418 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 FAM71F1Q96KD3 344 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 MARK4Q96L34 752 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 DUX5Q96PT3 197 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 RTP3Q9BQQ7 232 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 POLR3CQ9BUI4 534 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 C1QTNF4Q9BXJ3 329 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 LAT2Q9GZY6 243 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 RETREG1Q9H6L5 497 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 MINDY3Q9H8M7 445 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 ZBTB20Q9HC78 741 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 A4GALTQ9NPC4 353 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 GSN-AS1Q9NRJ2 163 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 OLFML3Q9NRN5 406 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 ABCB8Q9NUT2 735 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 DNAJC17Q9NVM6 304 aaKnown RBP2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 COQ3Q9NZJ6 369 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 MALT1Q9UDY8 824 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 ZDHHC2Q9UIJ5 367 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 DAPK2Q9UIK4 370 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 POU2F3Q9UKI9 436 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 ITGA11Q9UKX5 1188 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 ABCA10Q8WWZ4 1543 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 ABCC2Q92887 1545 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 CD109Q6YHK3 1445 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 WDR81Q562E7 1941 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 IQSEC2Q5JU85 1478 aa2.9□□□□□ -1.94
HMGB1P27-201ENST00000431429 KIAA0586Q9BVV6 1533 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 SLC33A1O00400 549 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 SLC22A2O15244 555 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 FLRT2O43155 660 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 RTN2O75298 545 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 BMP15O95972 392 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 PLGP00747 810 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 SNRNP70P08621 437 aaKnown RBP2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 IRF2P14316 349 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 MSH3P20585 1137 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 CA4P22748 312 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 HNF4AP41235 474 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 HOXA1P49639 335 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 VAMP7P51809 220 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 STX1BP61266 288 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 LGALS3BPQ08380 585 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 DMPKQ09013 629 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 SLC39A14Q15043 492 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 KBTBD12Q3ZCT8 623 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 CCNYL2Q5T2Q4 361 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 ZNF770Q6IQ21 691 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 CYB5D1Q6P9G0 228 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 PRSS55Q6UWB4 352 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 ZNF554Q86TJ5 538 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 NFE4Q86UQ8 179 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 ZDHHC17Q8IUH5 632 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 TMEM139Q8IV31 216 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 FOXP4Q8IVH2 680 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 UNC45BQ8IWX7 931 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 TUSC5Q8IXB3 177 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 SAMD14Q8IZD0 417 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 KBTBD3Q8NAB2 608 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 MSANTD4Q8NCY6 345 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 OR10Q1Q8NGQ4 319 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 OR52N5Q8NH56 324 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 PROX1Q92786 737 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 BCL2L2Q92843 193 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 MED30Q96HR3 178 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 HES6Q96HZ4 224 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 CABS1Q96KC9 395 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 MEIS3Q99687 375 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 MAP3K3Q99759 626 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 UTP14AQ9BVJ6 771 aaKnown RBP2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 CACNG6Q9BXT2 260 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 KRTAP4-5Q9BYR2 181 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 ZNF556Q9HAH1 456 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 SDR39U1Q9NRG7 319 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 ADPRHL2Q9NX46 363 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 SEPT10Q9P0V9 454 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 VPS18Q9P253 973 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 CACNG4Q9UBN1 327 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 ARMCX3Q9UH62 379 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 GPR132Q9UNW8 380 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 TMED3Q9Y3Q3 217 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 PCDHGA1Q9Y5H4 931 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 KLK4Q9Y5K2 254 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 SNX5Q9Y5X3 404 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 SHROOM2Q13796 1616 aa2.9□□□□□ -1.95
HMGB1P27-201ENST00000431429 EPRSP07814 1512 aaKnown RBP2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 A0A0B4J203 849 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 LOC101059948A0A1B0GTJ6 334 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 LRRD1A4D1F6 860 aa2.89□□□□□ -1.95
HMGB1P27-201ENST00000431429 SMTNL1A8MU46 457 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms