RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 C16orf45Q96MC5 204 aaPredicted RBP12.47□□□□□ -0.41
VRK3-203ENST00000424804 PANX3Q96QZ0 392 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 BARD1Q99728 777 aaKnown RBP12.47□□□□□ -0.41
VRK3-203ENST00000424804 CARD6Q9BX69 1037 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 LRRC4CQ9HCJ2 640 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 FBXO6Q9NRD1 293 aaPredicted RBP12.47□□□□□ -0.41
VRK3-203ENST00000424804 GPR83Q9NYM4 423 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 OR6C2Q9NZP2 312 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 C5AR2Q9P296 337 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 PLEKHB1Q9UF11 243 aaPredicted RBP12.47□□□□□ -0.41
VRK3-203ENST00000424804 CIDEBQ9UHD4 219 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 KLHL20Q9Y2M5 609 aa12.47□□□□□ -0.41
VRK3-203ENST00000424804 EFCAB8A8MWE9 144 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 E5RI56 91 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 NIPSNAP2O75323 286 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 OR2B3O76000 313 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 CHRM3P20309 590 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 PKLRP30613 574 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 OTX2P32243 289 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 CTBP1Q13363 440 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 LONRF1Q17RB8 773 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 C4orf17Q53FE4 359 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 DNAJC21Q5F1R6 531 aaKnown RBP12.46□□□□□ -0.41
VRK3-203ENST00000424804 DCAF10Q5QP82 559 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 RNF187Q5TA31 235 aaPredicted RBP12.46□□□□□ -0.41
VRK3-203ENST00000424804 MLIPQ5VWP3 458 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 IGFL3Q6UXB1 125 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 OTOAQ7RTW8 1153 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 DENND6AQ8IWF6 608 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 SLC22A15Q8IZD6 547 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 AGGF1Q8N302 714 aaeCLIP12.46□□□□□ -0.41
VRK3-203ENST00000424804 ZNF655Q8N720 491 aaPredicted RBP12.46□□□□□ -0.41
VRK3-203ENST00000424804 EFCAB3Q8N7B9 438 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.46□□□□□ -0.41
VRK3-203ENST00000424804 OR2Y1Q8NGV0 311 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 ASZ1Q8WWH4 475 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 SLCO2A1Q92959 643 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 SIGLEC10Q96LC7 697 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 PWWP2AQ96N64 755 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 P2RY12Q9H244 342 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 DPH5Q9H2P9 285 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 PPANQ9NQ55 473 aaKnown RBP12.46□□□□□ -0.41
VRK3-203ENST00000424804 RNF14Q9UBS8 474 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 POLG2Q9UHN1 485 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 CHMP2BQ9UQN3 213 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 NTNG1Q9Y2I2 539 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 PTRH2Q9Y3E5 179 aaKnown RBP12.46□□□□□ -0.41
VRK3-203ENST00000424804 AP1M2Q9Y6Q5 423 aa12.46□□□□□ -0.41
VRK3-203ENST00000424804 CRYBG3Q68DQ2 2970 aa12.46□□□□□ -0.42
VRK3-203ENST00000424804 USP1O94782 785 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 AGFG2O95081 481 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 CBX6O95503 412 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 PGAM1P18669 254 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 OGNP20774 298 aaKnown RBP12.45□□□□□ -0.42
VRK3-203ENST00000424804 AGXTP21549 392 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 ITGA8P53708 1063 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 RRADP55042 308 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 DCDP81605 110 aaKnown RBP12.45□□□□□ -0.42
VRK3-203ENST00000424804 PLOD1Q02809 727 aaPredicted RBP12.45□□□□□ -0.42
VRK3-203ENST00000424804 MYBPC3Q14896 1274 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 KIR2DS3Q14952 304 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 NKAIN1Q4KMZ8 207 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 MSS51Q4VC12 460 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 HSP90AA5PQ58FG0 334 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 CTSL3PQ5NE16 218 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 VWA5B1Q5TIE3 1220 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 FCRL6Q6DN72 434 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 COX15Q7KZN9 410 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 HOOK3Q86VS8 718 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 KCNMB4Q86W47 210 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 LRRC6Q86X45 466 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 RAB43Q86YS6 212 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 GPR135Q8IZ08 494 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 PDIK1LQ8N165 341 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 GALNT16Q8N428 558 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 PROKR1Q8TCW9 393 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 SSC4DQ8WTU2 575 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 LPGAT1Q92604 370 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 SNF8Q96H20 258 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 ZNF285Q96NJ3 590 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 CCDC68Q9H2F9 335 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 IARS2Q9NSE4 1012 aaKnown RBP12.45□□□□□ -0.42
VRK3-203ENST00000424804 P4HTMQ9NXG6 502 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 EURLQ9NYK6 297 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 SNX24Q9Y343 169 aa12.45□□□□□ -0.42
VRK3-203ENST00000424804 ZCWPW2A0A1B0GU75 182 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 C9J4A7 227 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 ZSCAN9O15535 394 aaPredicted RBP12.44□□□□□ -0.42
VRK3-203ENST00000424804 MED26O95402 600 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 PKMP14618 531 aaKnown RBP12.44□□□□□ -0.42
VRK3-203ENST00000424804 MAGP20916 626 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 RPS3P23396 243 aaKnown RBP eCLIP12.44□□□□□ -0.42
VRK3-203ENST00000424804 AOAHP28039 575 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 SLC1A2P43004 574 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 MAGEA3P43357 314 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 MPP1Q00013 466 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 CRYMQ14894 314 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 SLC9A5Q14940 896 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 MORF4L2Q15014 288 aa12.44□□□□□ -0.42
VRK3-203ENST00000424804 TYSND1Q2T9J0 566 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms